RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ZNF645Q8N7E2 425 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 PHB2Q99623 299 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 RNF167Q9H6Y7 350 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 DIABLOQ9NR28 239 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 TPSG1Q9NRR2 321 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 TRAV18A0A075B6X5 111 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 LINC01619G3V211 115 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 TUSC2O75896 110 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 SLC22A5O76082 557 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 CRYZL1O95825 349 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 TRGV3P03979 118 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 LGALS1P09382 135 aaKnown RBP12.04□□□□□ -0.48
SF3B3-215ENST00000577085 CLEC2LP0C7M8 214 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 NFYAP23511 347 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-215ENST00000577085 C19orf54Q5BKX5 351 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 CROCCP3Q8IVE0 287 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 ALX4Q9H161 411 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-215ENST00000577085 ANXA10Q9UJ72 324 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 MRPS7Q9Y2R9 242 aaKnown RBP12.04□□□□□ -0.48
SF3B3-215ENST00000577085 PRELID3BQ9Y3B1 194 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 OR2W1Q9Y3N9 320 aa12.04□□□□□ -0.48
SF3B3-215ENST00000577085 A0A087WXM4 84 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 C13orf42A0A1B0GVH6 325 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 OVOL1O14753 267 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 CREBL2O60519 120 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-215ENST00000577085 ACTL6BO94805 426 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 TNFAIP8O95379 198 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 IGHV3-11P01762 117 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
SF3B3-215ENST00000577085 INSL3P51460 131 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 TMEM177Q53S58 311 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 KCTD9Q7L273 389 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 TSPAN14Q8NG11 270 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 OR5T1Q8NG75 326 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 TMEM68Q96MH6 324 aa12.03□□□□□ -0.48
SF3B3-215ENST00000577085 A0A0A6YYH2 397 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 A0A0G2JLM5 398 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 A6NJ64 397 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 ARPC1BO15143 372 aaKnown RBP12.02□□□□□ -0.49
SF3B3-215ENST00000577085 MPPED1O15442 326 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 AIREO43918 545 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 FCGR3BO75015 233 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 TMEM127O75204 238 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 LY86O95711 162 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 IGLV2-23P01705 113 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 UBE2KP61086 200 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 PJVKQ0ZLH3 352 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 ZNF429Q86V71 674 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 POC5Q8NA72 575 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 OR5H6Q8NGV6 325 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 OSR1Q8TAX0 266 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-215ENST00000577085 ACOT12Q8WYK0 555 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 DCUN1D4Q92564 292 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 C5orf30Q96GV9 206 aa12.02□□□□□ -0.49
SF3B3-215ENST00000577085 H3BUA1 57 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 SSX5O60225 188 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 SAP30O75446 220 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 HLA-DQB1P01920 261 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 HSPB1P04792 205 aaKnown RBP12.01□□□□□ -0.49
SF3B3-215ENST00000577085 SLURP1P55000 103 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 TNXAQ16473 311 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 TEX45Q8NA69 505 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 BEST4Q8NFU0 473 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 PRR25Q96S07 402 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 COA4Q9NYJ1 87 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 SCOCQ9UIL1 159 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 SPATA2Q9UM82 520 aa12.01□□□□□ -0.49
SF3B3-215ENST00000577085 ZNF256Q9Y2P7 627 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-215ENST00000577085 IGHV4OR15-8A0A075B7B6 117 aa12□□□□□ -0.49
SF3B3-215ENST00000577085 A0A087WW49 117 aa12□□□□□ -0.49
SF3B3-215ENST00000577085 SRRM4A7MD48 611 aaKnown RBP12□□□□□ -0.49
SF3B3-215ENST00000577085 LINC00473A8K010 186 aa12□□□□□ -0.49
SF3B3-215ENST00000577085 CRYGBP07316 175 aa12□□□□□ -0.49
SF3B3-215ENST00000577085 OR2B11Q5JQS5 317 aa12□□□□□ -0.49
SF3B3-215ENST00000577085 ASPHD1Q5U4P2 390 aa12□□□□□ -0.49
SF3B3-215ENST00000577085 IDO2Q6ZQW0 420 aa12□□□□□ -0.49
SF3B3-215ENST00000577085 TCTEX1D2Q8WW35 142 aa12□□□□□ -0.49
SF3B3-215ENST00000577085 DDB2Q92466 427 aa12□□□□□ -0.49
SF3B3-215ENST00000577085 DLX4Q92988 240 aaPredicted RBP12□□□□□ -0.49
SF3B3-215ENST00000577085 SLC25A38Q96DW6 304 aa12□□□□□ -0.49
SF3B3-215ENST00000577085 S100A16Q96FQ6 103 aaKnown RBP12□□□□□ -0.49
SF3B3-215ENST00000577085 HSD17B10Q99714 261 aaKnown RBP12□□□□□ -0.49
SF3B3-215ENST00000577085 RBMX2Q9Y388 322 aaKnown RBP12□□□□□ -0.49
SF3B3-215ENST00000577085 DNAH3Q8TD57 4116 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 MSGN1A6NI15 193 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 APELAP0DMC3 54 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 AADACP22760 399 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 FCGR2CP31995 323 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 CBX5P45973 191 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 LSM3P62310 102 aaKnown RBP11.99□□□□□ -0.49
SF3B3-215ENST00000577085 PRSS8Q16651 343 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 OR4S2Q8NH73 311 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 SECTM1Q8WVN6 248 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 OR4C12Q96R67 309 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 B9D2Q9BPU9 175 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 RANGRFQ9HD47 186 aaPredicted RBP11.99□□□□□ -0.49
SF3B3-215ENST00000577085 IFT46Q9NQC8 304 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 TAS2R8Q9NYW2 309 aa11.99□□□□□ -0.49
SF3B3-215ENST00000577085 IGKV1D-13A0A0B4J2D9 117 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 ANKRD34BA5PLL1 514 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms