RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SCN3BQ9NY72 215 aa7.95□□□□□ -1.14
TVP23B-208ENST00000575261 PEMTQ9UBM1 199 aa7.95□□□□□ -1.14
TVP23B-208ENST00000575261 AK6Q9Y3D8 172 aaKnown RBP7.95□□□□□ -1.14
TVP23B-208ENST00000575261 PLECQ15149 4684 aaKnown RBP7.94□□□□□ -1.14
TVP23B-208ENST00000575261 SHISA3A0PJX4 238 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 ERICH4A6NGS2 130 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 CASQ2O14958 399 aaPredicted RBP7.94□□□□□ -1.14
TVP23B-208ENST00000575261 MPPED1O15442 326 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 DENRO43583 198 aaKnown RBP7.94□□□□□ -1.14
TVP23B-208ENST00000575261 CSN3P07498 182 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 FCGR3AP08637 254 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 HSMCR30P0CW71 290 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 APELAP0DMC3 54 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 RRASP10301 218 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 CALRP27797 417 aaKnown RBP7.94□□□□□ -1.14
TVP23B-208ENST00000575261 CLDN12P56749 244 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 RPS25P62851 125 aaKnown RBP7.94□□□□□ -1.14
TVP23B-208ENST00000575261 VMA21Q3ZAQ7 101 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 TMEM177Q53S58 311 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 ADAD2Q8NCV1 583 aaKnown RBP7.94□□□□□ -1.14
TVP23B-208ENST00000575261 OR2K2Q8NGT1 345 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 SRSF12Q8WXF0 261 aaKnown RBP7.94□□□□□ -1.14
TVP23B-208ENST00000575261 SNAPC3Q92966 411 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 FAM3DQ96BQ1 224 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 RAB3CQ96E17 227 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 ADAM30Q9UKF2 790 aa7.94□□□□□ -1.14
TVP23B-208ENST00000575261 RBM7Q9Y580 266 aaKnown RBP7.94□□□□□ -1.14
TVP23B-208ENST00000575261 TRBV6-7A0A0A0MS04 114 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 TMEM272A0A1B0GTI8 110 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 FAM223BA6NKX1 122 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 AIREO43918 545 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 CREBL2O60519 120 aaPredicted RBP7.93□□□□□ -1.14
TVP23B-208ENST00000575261 JTBO76095 146 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 OR9G9P0C7N8 305 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 PSMD7P51665 324 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 CD81P60033 236 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 UBE2KP61086 200 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 MLLT11Q13015 90 aaPredicted RBP7.93□□□□□ -1.14
TVP23B-208ENST00000575261 TPBGQ13641 420 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 EXOSC2Q13868 293 aaKnown RBP7.93□□□□□ -1.14
TVP23B-208ENST00000575261 IRF3Q14653 427 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 TNXAQ16473 311 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 C2orf76Q3KRA6 126 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 IGSF11Q5DX21 431 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 FAM223AQ8IWN6 122 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 LAX1Q8IWV1 398 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 TEX45Q8NA69 505 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 ACOT12Q8WYK0 555 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 C5orf30Q96GV9 206 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 ADTRPQ96IZ2 230 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 GINS4Q9BRT9 223 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 PLEKHA3Q9HB20 300 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 RAB22AQ9UL26 194 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 CEPT1Q9Y6K0 416 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 V9GY05 133 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 HYDINQ4G0P3 5121 aa7.93□□□□□ -1.14
TVP23B-208ENST00000575261 BIRC6Q9NR09 4857 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 IZUMO1RA6ND01 250 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 MSGN1A6NI15 193 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 SRRM4A7MD48 611 aaKnown RBP7.92□□□□□ -1.14
TVP23B-208ENST00000575261 BMPR1BO00238 502 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 RBMXL2O75526 392 aaKnown RBP7.92□□□□□ -1.14
TVP23B-208ENST00000575261 TUSC2O75896 110 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 ACTL6BO94805 426 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 TPPPO94811 219 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 CRYZL1O95825 349 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 GSTT2P0CG29 244 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 GSTT2BP0CG30 244 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 GADD45AP24522 165 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 RHOGP84095 191 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 PRSS8Q16651 343 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 MRGPRG-AS1Q2M3A8 158 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 HES5Q5TA89 166 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 IDO2Q6ZQW0 420 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 IL17DQ8TAD2 202 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 OSR1Q8TAX0 266 aaPredicted RBP7.92□□□□□ -1.14
TVP23B-208ENST00000575261 DYNLRB2Q8TF09 96 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 DDB2Q92466 427 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 SPIN2AQ99865 258 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 SPIN2BQ9BPZ2 258 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 CENPOQ9BU64 300 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 AKIP1Q9NQ31 210 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 SLC2A8Q9NY64 477 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 ZNF230Q9UIE0 474 aaPredicted RBP7.92□□□□□ -1.14
TVP23B-208ENST00000575261 KCNK7Q9Y2U2 307 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 TPRKBQ9Y3C4 175 aa7.92□□□□□ -1.14
TVP23B-208ENST00000575261 MFNGO00587 321 aa7.91□□□□□ -1.14
TVP23B-208ENST00000575261 HIST1H1DP16402 221 aaKnown RBP7.91□□□□□ -1.14
TVP23B-208ENST00000575261 GNB3P16520 340 aa7.91□□□□□ -1.14
TVP23B-208ENST00000575261 DUTP33316 252 aaKnown RBP7.91□□□□□ -1.14
TVP23B-208ENST00000575261 FABP5Q01469 135 aa7.91□□□□□ -1.14
TVP23B-208ENST00000575261 PLA2G7Q13093 441 aa7.91□□□□□ -1.14
TVP23B-208ENST00000575261 CD300EQ496F6 205 aaPredicted RBP7.91□□□□□ -1.14
TVP23B-208ENST00000575261 FAM209BQ5JX69 171 aa7.91□□□□□ -1.14
TVP23B-208ENST00000575261 OR10R2Q8NGX6 335 aa7.91□□□□□ -1.14
TVP23B-208ENST00000575261 MAFIPQ8WZ33 124 aa7.91□□□□□ -1.14
TVP23B-208ENST00000575261 FAM110AQ9BQ89 295 aa7.91□□□□□ -1.14
TVP23B-208ENST00000575261 NEURL2Q9BR09 285 aa7.91□□□□□ -1.14
TVP23B-208ENST00000575261 HIPK2Q9H2X6 1198 aa7.91□□□□□ -1.14
TVP23B-208ENST00000575261 RETNQ9HD89 108 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms