RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MCRIP2Q9BUT9 160 aaKnown RBP5.81□□□□□ -1.48
NUP88-205ENST00000572809 TOLLIPQ9H0E2 274 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 FBXL15Q9H469 300 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 AURKAIP1Q9NWT8 199 aaPredicted RBP5.81□□□□□ -1.48
NUP88-205ENST00000572809 ZNF230Q9UIE0 474 aaPredicted RBP5.81□□□□□ -1.48
NUP88-205ENST00000572809 ZNF580Q9UK33 172 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 GAB2Q9UQC2 676 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 WASHC3Q9Y3C0 194 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 WSB1Q9Y6I7 421 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 NOTCH3Q9UM47 2321 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 TRBV6-7A0A0A0MS04 114 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 TRAV41A0A0B4J266 112 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 G3V318 75 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 MFNGO00587 321 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 FCN1O00602 326 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 ATP6V0E1O15342 81 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 TFAP2AP05549 437 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 FCGR3AP08637 254 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 OR8U9P0C7N5 309 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 RPS19P39019 145 aaKnown RBP5.8□□□□□ -1.48
NUP88-205ENST00000572809 LINC00205P59089 165 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 CX3CL1P78423 397 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 TMEM267Q0VDI3 215 aaPredicted RBP5.8□□□□□ -1.48
NUP88-205ENST00000572809 PLGLAQ15195 96 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 SRSF7Q16629 238 aaKnown RBP eCLIP5.8□□□□□ -1.48
NUP88-205ENST00000572809 ZNF660Q6AZW8 331 aaPredicted RBP5.8□□□□□ -1.48
NUP88-205ENST00000572809 ZNF773Q6PK81 442 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 ZNF383Q8NA42 475 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.8□□□□□ -1.48
NUP88-205ENST00000572809 OR8U1Q8NH10 309 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 MAFIPQ8WZ33 124 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 DUX3Q96PT4 197 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 GPR61Q9BZJ8 451 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 OR51E2Q9H255 320 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 PARP11Q9NR21 331 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 DAPK2Q9UIK4 370 aa5.8□□□□□ -1.48
NUP88-205ENST00000572809 RRP15Q9Y3B9 282 aaKnown RBP5.8□□□□□ -1.48
NUP88-205ENST00000572809 RBM7Q9Y580 266 aaKnown RBP5.8□□□□□ -1.48
NUP88-205ENST00000572809 TGP01266 2768 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 M0R1X1 148 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 DIRAS3O95661 229 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 APOA2P02652 100 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 CD36P16671 472 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 HOXD3P31249 432 aaPredicted RBP5.79□□□□□ -1.48
NUP88-205ENST00000572809 SDC2P34741 201 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 RAB9AP51151 201 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 RAB25P57735 213 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 KRTAP10-11P60412 298 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 RAP2BP61225 183 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 MXD1Q05195 221 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 RAB32Q13637 225 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 KIAA0141Q14154 515 aaPredicted RBP5.79□□□□□ -1.48
NUP88-205ENST00000572809 PSG5Q15238 335 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 DEFB136Q30KP8 78 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 DEFB121Q5J5C9 76 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 HACD4Q5VWC8 232 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 SFXN4Q6P4A7 337 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 ZNF562Q6V9R5 426 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 Q6ZS49 121 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 ZNF491Q8N8L2 437 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 MINDY2Q8NBR6 621 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 OR11H1Q8NG94 326 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 C4orf3Q8WVX3 66 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 DPF1Q92782 380 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 FLYWCH2Q96CP2 140 aaKnown RBP5.79□□□□□ -1.48
NUP88-205ENST00000572809 UBE2E2Q96LR5 201 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 CLCC1Q96S66 551 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 TSNAXQ99598 290 aaKnown RBP5.79□□□□□ -1.48
NUP88-205ENST00000572809 GINS4Q9BRT9 223 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 CABLES2Q9BTV7 478 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 ST6GALNAC5Q9BVH7 336 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 WDR12Q9GZL7 423 aaKnown RBP5.79□□□□□ -1.48
NUP88-205ENST00000572809 KLK15Q9H2R5 256 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.79□□□□□ -1.48
NUP88-205ENST00000572809 SDHAF2Q9NX18 166 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 METTL1Q9UBP6 276 aaKnown RBP5.79□□□□□ -1.48
NUP88-205ENST00000572809 ELF5Q9UKW6 265 aaPredicted RBP5.79□□□□□ -1.48
NUP88-205ENST00000572809 NUBP2Q9Y5Y2 271 aa5.79□□□□□ -1.48
NUP88-205ENST00000572809 IGKV1D-8A0A087WSZ0 117 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 LOC100506127A0A0U1RQW1 187 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 A0A1W2PN81 502 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 PRSS29PA6NIE9 313 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 SCGNO76038 276 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 IGKV1-16P04430 117 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 CTXN2P0C2S0 81 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 EGR2P11161 476 aaPredicted RBP5.78□□□□□ -1.48
NUP88-205ENST00000572809 DTYMKP23919 212 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 CHRNA7P36544 502 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 LGALS7P47929 136 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 CRIP2P52943 208 aaPredicted RBP5.78□□□□□ -1.48
NUP88-205ENST00000572809 PITPNAQ00169 270 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 EGFEM1PQ0D2K5 195 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 NEDD8Q15843 81 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 ECSCRQ19T08 205 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 ZNF260Q3ZCT1 412 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 KCTD21Q4G0X4 260 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 AKIRIN2Q53H80 203 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 IDNKQ5T6J7 187 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 PPP1R27Q86WC6 154 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 PDPNQ86YL7 162 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms