RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PSG5Q15238 335 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 ACTBL2Q562R1 376 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 DHRS11Q6UWP2 260 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 ZNF818PQ6ZRF7 136 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 CENPVQ7Z7K6 275 aaPredicted RBP12.46□□□□□ -0.41
CHD3-215ENST00000572750 ZNF329Q86UD4 541 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 STPG2Q8N412 459 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 OR5AU1Q8NGC0 362 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 TSNAXQ99598 290 aaKnown RBP12.46□□□□□ -0.41
CHD3-215ENST00000572750 HSD17B10Q99714 261 aaKnown RBP12.46□□□□□ -0.41
CHD3-215ENST00000572750 TINAGL1Q9GZM7 467 aaPredicted RBP12.46□□□□□ -0.41
CHD3-215ENST00000572750 MMP27Q9H306 513 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 PARP11Q9NR21 331 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 IGHV7-81A0A0B4J1V7 117 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 PSMB11A5LHX3 300 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 FABP12A6NFH5 140 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 SHOXO15266 292 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 IGLV2-23P01705 113 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 TSPAN5P62079 268 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 TAGLNQ01995 201 aaKnown RBP12.45□□□□□ -0.42
CHD3-215ENST00000572750 MSMO1Q15800 293 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 RNASE10Q5GAN6 216 aaKnown RBP12.45□□□□□ -0.42
CHD3-215ENST00000572750 TCTEX1D4Q5JR98 221 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 VAX1Q5SQQ9 334 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 LIN54Q6MZP7 749 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 OR4D10Q8NGI6 311 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 OR6F1Q8NGZ6 308 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 CLCC1Q96S66 551 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 RNF5Q99942 180 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 CITED2Q99967 270 aaPredicted RBP12.45□□□□□ -0.42
CHD3-215ENST00000572750 PRELID3BQ9Y3B1 194 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 A3GALT2U3KPV4 340 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 V9GYH0 126 aa12.45□□□□□ -0.42
CHD3-215ENST00000572750 PLXNB1O43157 2135 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 WNK1Q9H4A3 2382 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 FCN1O00602 326 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 CTDSPLO15194 276 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 ATP6V0E1O15342 81 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 TSPAN15O95858 294 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 RRASP10301 218 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 GNRHRP30968 328 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 S100A5P33763 92 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 FAAP20Q6NZ36 180 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 ZNF66Q6ZN08 573 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 MFSD4AQ8N468 514 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 OR4X2Q8NGF9 303 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 CHPT1Q8WUD6 406 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 DGCR14Q96DF8 476 aaKnown RBP12.44□□□□□ -0.42
CHD3-215ENST00000572750 SOSTQ9BQB4 213 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 NDUFA13Q9P0J0 144 aa12.44□□□□□ -0.42
CHD3-215ENST00000572750 SRRM4A7MD48 611 aaKnown RBP12.43□□□□□ -0.42
CHD3-215ENST00000572750 RAMP3O60896 148 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 CA2P00918 260 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 RLN1P04808 185 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 TBPP20226 339 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 BRWD1-AS2P59051 145 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 TAS2R19P59542 299 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 NSUN5P1Q3KNT7 163 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 KHDC1LQ5JSQ8 128 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 IDO2Q6ZQW0 420 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 TMEM229BQ8NBD8 167 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 OR51H1Q8NH63 302 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 OR4S2Q8NH73 311 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 ABHD5Q8WTS1 349 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 OR51J1Q9H342 316 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 RABL2AQ9UBK7 228 aaPredicted RBP12.43□□□□□ -0.42
CHD3-215ENST00000572750 RABL2BQ9UNT1 228 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 FBXO7Q9Y3I1 522 aa12.43□□□□□ -0.42
CHD3-215ENST00000572750 A0A1W2PRX2 142 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 M0QZ24 198 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 GSTZ1O43708 216 aaPredicted RBP12.42□□□□□ -0.42
CHD3-215ENST00000572750 CD74P04233 296 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 IFNA6P05013 189 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 VDAC1P21796 283 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 PPP5CP53041 499 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 GNB1P62873 340 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 CX3CL1P78423 397 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 SSBP1Q04837 148 aaKnown RBP12.42□□□□□ -0.42
CHD3-215ENST00000572750 PJVKQ0ZLH3 352 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 ZNF79Q15937 498 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 ECSCRQ19T08 205 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 C2orf68Q2NKX9 166 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 PHLDA2Q53GA4 152 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 AADACL3Q5VUY0 350 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 STEAP1BQ6NZ63 245 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 CCDC190Q86UF4 302 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 ZBTB34Q8NCN2 500 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 OSR1Q8TAX0 266 aaPredicted RBP12.42□□□□□ -0.42
CHD3-215ENST00000572750 WSB1Q9Y6I7 421 aa12.42□□□□□ -0.42
CHD3-215ENST00000572750 ADARB2-AS1A8MUL3 147 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 G3V318 75 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 RAB3DO95716 219 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 IGF1P05019 195 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 CRYGBP07316 175 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 CSF1P09603 554 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 SAA1P0DJI8 122 aaPredicted RBP12.41□□□□□ -0.42
CHD3-215ENST00000572750 LGALS7P47929 136 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 SLC35B1P78383 322 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 SSBP2P81877 361 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms