RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 UNQ5815/PRO19632Q6UWF5 114 aa15.7■□□□□ 0.1
NUP88-204ENST00000572290 ZNF491Q8N8L2 437 aa15.7■□□□□ 0.1
NUP88-204ENST00000572290 ARPC1AQ92747 370 aa15.7■□□□□ 0.1
NUP88-204ENST00000572290 GPR61Q9BZJ8 451 aa15.7■□□□□ 0.1
NUP88-204ENST00000572290 VSIG4Q9Y279 399 aa15.7■□□□□ 0.1
NUP88-204ENST00000572290 RBMX2Q9Y388 322 aaKnown RBP15.7■□□□□ 0.1
NUP88-204ENST00000572290 SRRM4A7MD48 611 aaKnown RBP15.69■□□□□ 0.1
NUP88-204ENST00000572290 SOX15O60248 233 aa15.69■□□□□ 0.1
NUP88-204ENST00000572290 FCER2P06734 321 aa15.69■□□□□ 0.1
NUP88-204ENST00000572290 CRYGBP07316 175 aa15.69■□□□□ 0.1
NUP88-204ENST00000572290 RAB25P57735 213 aa15.69■□□□□ 0.1
NUP88-204ENST00000572290 TAS2R20P59543 309 aa15.69■□□□□ 0.1
NUP88-204ENST00000572290 FXYD3Q14802 87 aa15.69■□□□□ 0.1
NUP88-204ENST00000572290 AKIRIN2Q53H80 203 aa15.69■□□□□ 0.1
NUP88-204ENST00000572290 TMEM69Q5SWH9 247 aa15.69■□□□□ 0.1
NUP88-204ENST00000572290 LFNGQ8NES3 379 aa15.69■□□□□ 0.1
NUP88-204ENST00000572290 MCRIP2Q9BUT9 160 aaKnown RBP15.69■□□□□ 0.1
NUP88-204ENST00000572290 GNB4Q9HAV0 340 aa15.69■□□□□ 0.1
NUP88-204ENST00000572290 ARPC1BO15143 372 aaKnown RBP15.68■□□□□ 0.1
NUP88-204ENST00000572290 CNIH1O95406 144 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 CRYZL1O95825 349 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 IGLV2-14P01704 120 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 FCGR2CP31995 323 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 VMA21Q3ZAQ7 101 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 ACTBL2Q562R1 376 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 KCTD9Q7L273 389 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 ANKRD13BQ86YJ7 626 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 OR5M8Q8NGP6 311 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 GRPEL2Q8TAA5 225 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 OSR1Q8TAX0 266 aaPredicted RBP15.68■□□□□ 0.1
NUP88-204ENST00000572290 SNAPC3Q92966 411 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 COMMD3Q9UBI1 195 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 PRELID3BQ9Y3B1 194 aa15.68■□□□□ 0.1
NUP88-204ENST00000572290 MEIS3P1A6NDR6 274 aa15.67■□□□□ 0.1
NUP88-204ENST00000572290 FCGR3BO75015 233 aa15.67■□□□□ 0.1
NUP88-204ENST00000572290 AADACP22760 399 aa15.67■□□□□ 0.1
NUP88-204ENST00000572290 UBE2KP61086 200 aa15.67■□□□□ 0.1
NUP88-204ENST00000572290 GNB1P62873 340 aa15.67■□□□□ 0.1
NUP88-204ENST00000572290 PJVKQ0ZLH3 352 aa15.67■□□□□ 0.1
NUP88-204ENST00000572290 PYHIN1Q6K0P9 492 aa15.67■□□□□ 0.1
NUP88-204ENST00000572290 OR11H1Q8NG94 326 aa15.67■□□□□ 0.1
NUP88-204ENST00000572290 OR5B12Q96R08 314 aa15.67■□□□□ 0.1
NUP88-204ENST00000572290 MRPS26Q9BYN8 205 aaKnown RBP15.67■□□□□ 0.1
NUP88-204ENST00000572290 IFT46Q9NQC8 304 aa15.67■□□□□ 0.1
NUP88-204ENST00000572290 AURKAIP1Q9NWT8 199 aaPredicted RBP15.67■□□□□ 0.1
NUP88-204ENST00000572290 I3L521 148 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 GABARAPO95166 117 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 CD40LGP29965 261 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 RPL30P62888 115 aaKnown RBP15.66■□□□□ 0.1
NUP88-204ENST00000572290 SSBP2P81877 361 aaPredicted RBP15.66■□□□□ 0.1
NUP88-204ENST00000572290 RUNX1Q01196 453 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 TEX45Q8NA69 505 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 OR5AP2Q8NGF4 316 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 CASTOR1Q8WTX7 329 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 ACOT12Q8WYK0 555 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 DPF1Q92782 380 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 CMTM3Q96MX0 182 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 HSD17B10Q99714 261 aaKnown RBP15.66■□□□□ 0.1
NUP88-204ENST00000572290 DCUN1D5Q9BTE7 237 aa15.66■□□□□ 0.1
NUP88-204ENST00000572290 NAA50Q9GZZ1 169 aaKnown RBP15.66■□□□□ 0.1
NUP88-204ENST00000572290 MRPS7Q9Y2R9 242 aaKnown RBP15.66■□□□□ 0.1
NUP88-204ENST00000572290 PLXNB1O43157 2135 aa15.65■□□□□ 0.1
NUP88-204ENST00000572290 PPYP01298 95 aa15.65■□□□□ 0.1
NUP88-204ENST00000572290 EIF4EP06730 217 aaKnown RBP15.65■□□□□ 0.1
NUP88-204ENST00000572290 RORCP51449 518 aa15.65■□□□□ 0.1
NUP88-204ENST00000572290 FHL3Q13643 280 aa15.65■□□□□ 0.1
NUP88-204ENST00000572290 CDK10Q15131 360 aa15.65■□□□□ 0.1
NUP88-204ENST00000572290 OR2B11Q5JQS5 317 aa15.65■□□□□ 0.1
NUP88-204ENST00000572290 OVCH2Q7RTZ1 564 aa15.65■□□□□ 0.1
NUP88-204ENST00000572290 OR1N2Q8NGR9 330 aa15.65■□□□□ 0.1
NUP88-204ENST00000572290 SECTM1Q8WVN6 248 aa15.65■□□□□ 0.1
NUP88-204ENST00000572290 TCTEX1D2Q8WW35 142 aa15.65■□□□□ 0.1
NUP88-204ENST00000572290 PRKDCP78527 4128 aaKnown RBP15.65■□□□□ 0.1
NUP88-204ENST00000572290 DNAH3Q8TD57 4116 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 APOA1P02647 267 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 HOXD3P31249 432 aaPredicted RBP15.64■□□□□ 0.09
NUP88-204ENST00000572290 PRSS3P35030 304 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 EIF4EBP1Q13541 118 aaPredicted RBP15.64■□□□□ 0.09
NUP88-204ENST00000572290 MSMO1Q15800 293 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 CTF1Q16619 201 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 GPR107Q5VW38 600 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 ZNF66Q6ZN08 573 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 MFSD4AQ8N468 514 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 MRAPQ8TCY5 172 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 GIMAP1Q8WWP7 306 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 MS4A10Q96PG2 267 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 SLA2Q9H6Q3 261 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 CCL28Q9NRJ3 127 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 TAS2R8Q9NYW2 309 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 ANAPC10Q9UM13 185 aa15.64■□□□□ 0.09
NUP88-204ENST00000572290 SMIM31A0A1B0GVY4 71 aa15.63■□□□□ 0.09
NUP88-204ENST00000572290 ZNF616Q08AN1 781 aa15.63■□□□□ 0.09
NUP88-204ENST00000572290 PRSS8Q16651 343 aa15.63■□□□□ 0.09
NUP88-204ENST00000572290 MRGPRG-AS1Q2M3A8 158 aa15.63■□□□□ 0.09
NUP88-204ENST00000572290 IDO2Q6ZQW0 420 aa15.63■□□□□ 0.09
NUP88-204ENST00000572290 ZBTB34Q8NCN2 500 aa15.63■□□□□ 0.09
NUP88-204ENST00000572290 OR4S2Q8NH73 311 aa15.63■□□□□ 0.09
NUP88-204ENST00000572290 TMEM68Q96MH6 324 aa15.63■□□□□ 0.09
NUP88-204ENST00000572290 SLC5A7Q9GZV3 580 aa15.63■□□□□ 0.09
NUP88-204ENST00000572290 OR8U8P0C7N1 319 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms