RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 KCTD18Q6PI47 426 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 DHRS11Q6UWP2 260 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 WDR82Q6UXN9 313 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 ADAMTSL5Q6ZMM2 481 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 FAM231DQ6ZW35 169 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 MRGPRGQ86SM5 289 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 PIP4P1Q86T03 277 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 SNX29P2Q8IUI4 249 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 FAM24BQ8N5W8 94 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 RELL2Q8NC24 303 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 BEST4Q8NFU0 473 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 ZNF417Q8TAU3 575 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 GPR148Q8TDV2 347 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 RNF128Q8TEB7 428 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 NEU4Q8WWR8 484 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 ARL11Q969Q4 196 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 APOBEC3DQ96AK3 386 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 FGGYQ96C11 551 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 DDIT4LQ96D03 193 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 OXGR1Q96P68 337 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 SCGB3A2Q96PL1 93 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 ZNF587Q96SQ5 575 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 FOXC2Q99958 501 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 HES7Q9BYE0 225 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 DEFB126Q9BYW3 111 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 SLC25A39Q9BZJ4 359 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 CXXC4Q9H2H0 198 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 RERGLQ9H628 205 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 ELL3Q9HB65 397 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 ACKR4Q9NPB9 350 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 CMC2Q9NRP2 79 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 DEPPQ9NTK1 212 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 TAS2R5Q9NYW4 299 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 ZNF224Q9NZL3 707 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 PLEKHB1Q9UF11 243 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 C19orf25Q9UFG5 118 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 ING1Q9UK53 422 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 CARHSP1Q9Y2V2 147 aaKnown RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 U3KQ87 197 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 DMDP11532 3685 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 CELSR3Q9NYQ7 3312 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 FRYLO94915 3013 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 TANC2Q9HCD6 1990 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 TRAV36DV7A0A075B6V5 113 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 TRAV30A0A087WSZ9 112 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 IGHV3-15A0A0B4J1V0 119 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 TRAV1-2A0A0B4J238 106 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 A0A1W2PPI3 338 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 CIB4A0PJX0 185 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 C7orf66A4D0T2 115 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 RIIAD1A6NNX1 92 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 SRRM4A7MD48 611 aaKnown RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 A8MWP6 167 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 INMT-MINDY4F8WBC2 141 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 H3BSH0 61 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 M0R1B8 84 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 GABRPO00591 440 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 HSD17B6O14756 317 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 PLA2G10O15496 165 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 GSTZ1O43708 216 aaPredicted RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 CXCL13O43927 109 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 GNG7O60262 68 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 NCR1O76036 304 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 CDRT1O95170 752 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 KNG1P01042 644 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 APOHP02749 345 aaPredicted RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 CD14P08571 375 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 OR5AL1P0C617 328 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 OR5H8P0DN80 308 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 ESDP10768 282 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 CD79AP11912 226 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 FOLR2P14207 255 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 LIFP15018 202 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 SPNP16150 400 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 RAB3BP20337 219 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 ZBTB25P24278 435 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 TFPI2P48307 235 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 ZNF133P52736 654 aaPredicted RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 CAV3P56539 151 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 OR12D2P58182 307 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 TAS2R30P59541 319 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 RPL27P61353 136 aaKnown RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 PPP1CBP62140 327 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 CX3CL1P78423 397 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 RUNX1Q01196 453 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 FABP5Q01469 135 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 MXD1Q05195 221 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 OR5I1Q13606 314 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 GGTLC2Q14390 218 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 ACOT6Q3I5F7 207 aaPredicted RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 ALG10Q5BKT4 473 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 CLLU1Q5K131 121 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 C1orf194Q5T5A4 169 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 ASPHD1Q5U4P2 390 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 SFXN4Q6P4A7 337 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 HSD17B13Q7Z5P4 300 aaPredicted RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 RPS19BP1Q86WX3 136 aaKnown RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 SPACA3Q8IXA5 215 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 LINC01561Q8N1V8 128 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 OSR2Q8N2R0 312 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms