RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ZNF491Q8N8L2 437 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 ABHD5Q8WTS1 349 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 SNAPC3Q92966 411 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 S100A16Q96FQ6 103 aaKnown RBP10.15□□□□□ -0.78
CNOT1-220ENST00000569916 UBE2E2Q96LR5 201 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 NAA50Q9GZZ1 169 aaKnown RBP10.15□□□□□ -0.78
CNOT1-220ENST00000569916 GNB4Q9HAV0 340 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 NECAP2Q9NVZ3 263 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 FOXA2Q9Y261 457 aaPredicted RBP10.15□□□□□ -0.78
CNOT1-220ENST00000569916 RBMX2Q9Y388 322 aaKnown RBP10.15□□□□□ -0.78
CNOT1-220ENST00000569916 MEIS3P1A6NDR6 274 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 SHOXO15266 292 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 SLC22A5O76082 557 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 CRYZL1O95825 349 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 FCER2P06734 321 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 CBX5P45973 191 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 RAB9AP51151 201 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 TAS2R20P59543 309 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 PJVKQ0ZLH3 352 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 EIF4EBP1Q13541 118 aaPredicted RBP10.14□□□□□ -0.79
CNOT1-220ENST00000569916 TMEM69Q5SWH9 247 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 TMEM65Q6PI78 240 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 KCTD9Q7L273 389 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 OVCH2Q7RTZ1 564 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 ANKRD13BQ86YJ7 626 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 ARPC1AQ92747 370 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 AURKAIP1Q9NWT8 199 aaPredicted RBP10.14□□□□□ -0.79
CNOT1-220ENST00000569916 ANAPC10Q9UM13 185 aa10.14□□□□□ -0.79
CNOT1-220ENST00000569916 I3L521 148 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 EIF4EP06730 217 aaKnown RBP10.13□□□□□ -0.79
CNOT1-220ENST00000569916 AADACP22760 399 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 FCGR2CP31995 323 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 RPL30P62888 115 aaKnown RBP10.13□□□□□ -0.79
CNOT1-220ENST00000569916 TMEM267Q0VDI3 215 aaPredicted RBP10.13□□□□□ -0.79
CNOT1-220ENST00000569916 FHL3Q13643 280 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 FXYD3Q14802 87 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 CTF1Q16619 201 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 MRGPRG-AS1Q2M3A8 158 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 AKIRIN2Q53H80 203 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 ACTBL2Q562R1 376 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 UNQ5815/PRO19632Q6UWF5 114 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 REC114Q7Z4M0 266 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 LFNGQ8NES3 379 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 GRPEL2Q8TAA5 225 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 OSR1Q8TAX0 266 aaPredicted RBP10.13□□□□□ -0.79
CNOT1-220ENST00000569916 CASTOR1Q8WTX7 329 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 MRPS26Q9BYN8 205 aaKnown RBP10.13□□□□□ -0.79
CNOT1-220ENST00000569916 VSIG4Q9Y279 399 aa10.13□□□□□ -0.79
CNOT1-220ENST00000569916 PPYP01298 95 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 ALDH3B2P48448 385 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 RAB25P57735 213 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 UBE2KP61086 200 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 GNB1P62873 340 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 RUNX1Q01196 453 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 VMA21Q3ZAQ7 101 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 OR2B11Q5JQS5 317 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 ASPHD1Q5U4P2 390 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 PYHIN1Q6K0P9 492 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 OR11H1Q8NG94 326 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 OR5AP2Q8NGF4 316 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 OR5M8Q8NGP6 311 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 HSD17B10Q99714 261 aaKnown RBP10.12□□□□□ -0.79
CNOT1-220ENST00000569916 MCRIP2Q9BUT9 160 aaKnown RBP10.12□□□□□ -0.79
CNOT1-220ENST00000569916 IFT46Q9NQC8 304 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 COMMD3Q9UBI1 195 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 MRPS7Q9Y2R9 242 aaKnown RBP10.12□□□□□ -0.79
CNOT1-220ENST00000569916 PRELID3BQ9Y3B1 194 aa10.12□□□□□ -0.79
CNOT1-220ENST00000569916 FCGR3BO75015 233 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 APOA1P02647 267 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 SAA1P0DJI8 122 aaPredicted RBP10.11□□□□□ -0.79
CNOT1-220ENST00000569916 HOXD3P31249 432 aaPredicted RBP10.11□□□□□ -0.79
CNOT1-220ENST00000569916 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 EGFEM1PQ0D2K5 195 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 CDK10Q15131 360 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 MSMO1Q15800 293 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 GPR107Q5VW38 600 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 IDO2Q6ZQW0 420 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 TEX45Q8NA69 505 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 SECTM1Q8WVN6 248 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 TCTEX1D2Q8WW35 142 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 ACOT12Q8WYK0 555 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 CMTM3Q96MX0 182 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 OR5B12Q96R08 314 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 GPHA2Q96T91 129 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 GPR61Q9BZJ8 451 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 CCL28Q9NRJ3 127 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 TAS2R8Q9NYW2 309 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 TGP01266 2768 aa10.11□□□□□ -0.79
CNOT1-220ENST00000569916 HPGDSO60760 199 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 CNIH1O95406 144 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 NAT1P18440 290 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 ELK1P19419 428 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 PRSS3P35030 304 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 RORCP51449 518 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 BRWD1-AS2P59051 145 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 ZNF616Q08AN1 781 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 PRSS8Q16651 343 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 ZNF66Q6ZN08 573 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 MFSD4AQ8N468 514 aa10.1□□□□□ -0.79
CNOT1-220ENST00000569916 OR1N2Q8NGR9 330 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms