RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 NOTOA8MTQ0 251 aa17.36■□□□□ 0.37
RBFOX1-219ENST00000569895 CTXN2P0C2S0 81 aa17.36■□□□□ 0.37
RBFOX1-219ENST00000569895 FGF9P31371 208 aaPredicted RBP17.36■□□□□ 0.37
RBFOX1-219ENST00000569895 VMA21Q3ZAQ7 101 aa17.36■□□□□ 0.37
RBFOX1-219ENST00000569895 CDNFQ49AH0 187 aa17.36■□□□□ 0.37
RBFOX1-219ENST00000569895 UBE2UQ5VVX9 321 aa17.36■□□□□ 0.37
RBFOX1-219ENST00000569895 H1FOOQ8IZA3 346 aaPredicted RBP17.36■□□□□ 0.37
RBFOX1-219ENST00000569895 FCGR1BQ92637 280 aa17.36■□□□□ 0.37
RBFOX1-219ENST00000569895 SCGNO76038 276 aa17.35■□□□□ 0.37
RBFOX1-219ENST00000569895 SNRPBP14678 240 aaKnown RBP17.35■□□□□ 0.37
RBFOX1-219ENST00000569895 GP9P14770 177 aa17.35■□□□□ 0.37
RBFOX1-219ENST00000569895 SPNP16150 400 aa17.35■□□□□ 0.37
RBFOX1-219ENST00000569895 PSMB9P28065 219 aa17.35■□□□□ 0.37
RBFOX1-219ENST00000569895 PJVKQ0ZLH3 352 aa17.35■□□□□ 0.37
RBFOX1-219ENST00000569895 TPRA1Q86W33 373 aa17.35■□□□□ 0.37
RBFOX1-219ENST00000569895 TEX45Q8NA69 505 aa17.35■□□□□ 0.37
RBFOX1-219ENST00000569895 DNAH9Q9NYC9 4486 aa17.35■□□□□ 0.37
RBFOX1-219ENST00000569895 BRI3O95415 125 aa17.34■□□□□ 0.37
RBFOX1-219ENST00000569895 AADACP22760 399 aa17.34■□□□□ 0.37
RBFOX1-219ENST00000569895 SPARTQ8N0X7 666 aa17.34■□□□□ 0.37
RBFOX1-219ENST00000569895 PHB2Q99623 299 aa17.34■□□□□ 0.37
RBFOX1-219ENST00000569895 ST6GALNAC5Q9BVH7 336 aa17.34■□□□□ 0.37
RBFOX1-219ENST00000569895 YTHDF1Q9BYJ9 559 aaKnown RBP17.34■□□□□ 0.37
RBFOX1-219ENST00000569895 DCSTAMPQ9H295 470 aa17.34■□□□□ 0.37
RBFOX1-219ENST00000569895 TXNL4BQ9NX01 149 aaKnown RBP17.34■□□□□ 0.37
RBFOX1-219ENST00000569895 STUB1Q9UNE7 303 aa17.34■□□□□ 0.37
RBFOX1-219ENST00000569895 SSR3Q9UNL2 185 aa17.34■□□□□ 0.37
RBFOX1-219ENST00000569895 SRRM4A7MD48 611 aaKnown RBP17.33■□□□□ 0.36
RBFOX1-219ENST00000569895 SLC22A5O76082 557 aa17.33■□□□□ 0.36
RBFOX1-219ENST00000569895 DUTP33316 252 aaKnown RBP17.33■□□□□ 0.36
RBFOX1-219ENST00000569895 UBE2KP61086 200 aa17.33■□□□□ 0.36
RBFOX1-219ENST00000569895 HACD4Q5VWC8 232 aa17.33■□□□□ 0.36
RBFOX1-219ENST00000569895 NR2C2APQ86WQ0 139 aa17.33■□□□□ 0.36
RBFOX1-219ENST00000569895 OSR1Q8TAX0 266 aaPredicted RBP17.33■□□□□ 0.36
RBFOX1-219ENST00000569895 USMG5Q96IX5 58 aa17.33■□□□□ 0.36
RBFOX1-219ENST00000569895 CREBL2O60519 120 aaPredicted RBP17.32■□□□□ 0.36
RBFOX1-219ENST00000569895 CRYZL1O95825 349 aa17.32■□□□□ 0.36
RBFOX1-219ENST00000569895 SSBP2P81877 361 aaPredicted RBP17.32■□□□□ 0.36
RBFOX1-219ENST00000569895 ANKRD13BQ86YJ7 626 aa17.32■□□□□ 0.36
RBFOX1-219ENST00000569895 DDB2Q92466 427 aa17.32■□□□□ 0.36
RBFOX1-219ENST00000569895 C5orf30Q96GV9 206 aa17.32■□□□□ 0.36
RBFOX1-219ENST00000569895 TINAGL1Q9GZM7 467 aaPredicted RBP17.32■□□□□ 0.36
RBFOX1-219ENST00000569895 IGKV1D-8A0A087WSZ0 117 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 SMIM30A4D0T7 59 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 ANKRD34BA5PLL1 514 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 MSGN1A6NI15 193 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 PRSS8Q16651 343 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 TATDN3Q17R31 274 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 ZNF645Q8N7E2 425 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 DCUN1D5Q9BTE7 237 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 RSRP1Q9BUV0 290 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 COA4Q9NYJ1 87 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 DAPK2Q9UIK4 370 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 PRELID3BQ9Y3B1 194 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 OR2W1Q9Y3N9 320 aa17.31■□□□□ 0.36
RBFOX1-219ENST00000569895 ACTL6BO94805 426 aa17.3■□□□□ 0.36
RBFOX1-219ENST00000569895 ATP6V1G2O95670 118 aa17.3■□□□□ 0.36
RBFOX1-219ENST00000569895 CD36P16671 472 aa17.3■□□□□ 0.36
RBFOX1-219ENST00000569895 GNG2P59768 71 aa17.3■□□□□ 0.36
RBFOX1-219ENST00000569895 TNXAQ16473 311 aa17.3■□□□□ 0.36
RBFOX1-219ENST00000569895 CNIH2Q6PI25 160 aa17.3■□□□□ 0.36
RBFOX1-219ENST00000569895 ELF5Q9UKW6 265 aaPredicted RBP17.3■□□□□ 0.36
RBFOX1-219ENST00000569895 MRPS7Q9Y2R9 242 aaKnown RBP17.3■□□□□ 0.36
RBFOX1-219ENST00000569895 LINC00473A8K010 186 aa17.29■□□□□ 0.36
RBFOX1-219ENST00000569895 J3QRK9 145 aa17.29■□□□□ 0.36
RBFOX1-219ENST00000569895 MPPED1O15442 326 aa17.29■□□□□ 0.36
RBFOX1-219ENST00000569895 ACOT12Q8WYK0 555 aa17.29■□□□□ 0.36
RBFOX1-219ENST00000569895 PEF1Q9UBV8 284 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-219ENST00000569895 RRP15Q9Y3B9 282 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-219ENST00000569895 HLA-DQB1P01920 261 aa17.28■□□□□ 0.36
RBFOX1-219ENST00000569895 NFYAP23511 347 aaPredicted RBP17.28■□□□□ 0.36
RBFOX1-219ENST00000569895 KLF5Q13887 457 aaPredicted RBP17.28■□□□□ 0.36
RBFOX1-219ENST00000569895 ZNF343Q6P1L6 599 aa17.28■□□□□ 0.36
RBFOX1-219ENST00000569895 SBSPONQ8IVN8 264 aa17.28■□□□□ 0.36
RBFOX1-219ENST00000569895 SRSF12Q8WXF0 261 aaKnown RBP17.28■□□□□ 0.36
RBFOX1-219ENST00000569895 SORL1Q92673 2214 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 TMEM235A6NFC5 223 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 FCGR3BO75015 233 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 TUSC2O75896 110 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 IGLV1-51P01701 117 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 OR9G9P0C7N8 305 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 FRMD6-AS1P0C7T7 363 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 CDK10Q15131 360 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 SFXN4Q6P4A7 337 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 IDO2Q6ZQW0 420 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 KCTD9Q7L273 389 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 OVCH2Q7RTZ1 564 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 MMD2Q8IY49 270 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 OR9G4Q8NGQ1 327 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 NUDCD2Q8WVJ2 157 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 SPIN2AQ99865 258 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 SPIN2BQ9BPZ2 258 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 ZMAT4Q9H898 229 aa17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 RBMX2Q9Y388 322 aaKnown RBP17.27■□□□□ 0.36
RBFOX1-219ENST00000569895 H0Y980 276 aa17.26■□□□□ 0.35
RBFOX1-219ENST00000569895 C3orf84H3BNL1 204 aa17.26■□□□□ 0.35
RBFOX1-219ENST00000569895 APELAP0DMC3 54 aa17.26■□□□□ 0.35
RBFOX1-219ENST00000569895 SCAND1P57086 179 aa17.26■□□□□ 0.35
RBFOX1-219ENST00000569895 MRGPRG-AS1Q2M3A8 158 aa17.26■□□□□ 0.35
RBFOX1-219ENST00000569895 ADAD2Q8NCV1 583 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms