RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 RPA2P15927 270 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 ZNF182P17025 639 aaPredicted RBP7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 DUTP33316 252 aaKnown RBP7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 PRSS3P35030 304 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 CHRNA7P36544 502 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 THBS3P49746 956 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 RPL23AP62750 156 aaKnown RBP7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 CX3CL1P78423 397 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 NDPQ00604 133 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 PJVKQ0ZLH3 352 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 CBX3Q13185 183 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 SRSF7Q16629 238 aaKnown RBP eCLIP7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 RTL8BQ17RB0 113 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 CXorf66Q5JRM2 361 aaPredicted RBP7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 FAM71F2Q6NXP2 309 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 TEX38Q6PEX7 206 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 UNQ5815/PRO19632Q6UWF5 114 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 Q6ZS49 121 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 SSX9Q7RTT3 188 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 VKORC1L1Q8N0U8 176 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 ZNF645Q8N7E2 425 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 NPBQ8NG41 125 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 TCTEX1D2Q8WW35 142 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 HARBI1Q96MB7 349 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 TSNAXQ99598 290 aaKnown RBP7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 SLC5A7Q9GZV3 580 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 KLK15Q9H2R5 256 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 ZNF355PQ9NSJ1 428 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 A0A0A6YYH2 397 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 TRAV41A0A0B4J266 112 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 A6NJ64 397 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 SRRM4A7MD48 611 aaKnown RBP7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 SULT1C2O00338 296 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 CTDSP2O14595 271 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 NOL3O60936 208 aaKnown RBP7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 NDUFA3O95167 84 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 DIRAS3O95661 229 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 HLA-DRB1P01911 266 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 IGLL1P15814 213 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 HERV-K104P61576 105 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 DEFA5Q01523 94 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 TMEM65Q6PI78 240 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 KCTD9Q7L273 389 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 PPP1R27Q86WC6 154 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 PDPNQ86YL7 162 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 LAX1Q8IWV1 398 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 LFNGQ8NES3 379 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 OR5T1Q8NG75 326 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 OR5H2Q8NGV7 314 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 ACOT12Q8WYK0 555 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 PHB2Q99623 299 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 ZNF2Q9BSG1 426 aaPredicted RBP7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 C6orf62Q9GZU0 229 aaPredicted RBP7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 TOLLIPQ9H0E2 274 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 GHITMQ9H3K2 345 aa7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 RBMX2Q9Y388 322 aaKnown RBP7.07□□□□□ -1.28
GTF3C1-210ENST00000569394 M0QYG6 137 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 ARPC1BO15143 372 aaKnown RBP7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 RBBP9O75884 186 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 PPYP01298 95 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 IGLV2-14P01704 120 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 IGLV2-23P01705 113 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 IGHV3-11P01762 117 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 APOA1P02647 267 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 HRH1P35367 487 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 CBX5P45973 191 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 RPL5P46777 297 aaKnown RBP7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 TSPAN5P62079 268 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 FXYD3Q14802 87 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 CDK10Q15131 360 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 TNXAQ16473 311 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 ZNF818PQ6ZRF7 136 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 ZNF695Q8IW36 515 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 MFSD4AQ8N468 514 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 OR5AP2Q8NGF4 316 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 OR51H1Q8NH63 302 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 AP3S1Q92572 193 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 GON7Q9BXV9 100 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 ALX4Q9H161 411 aaPredicted RBP7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 GNB4Q9HAV0 340 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 SCOCQ9UIL1 159 aa7.06□□□□□ -1.28
GTF3C1-210ENST00000569394 H3BMQ9 156 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 MPPED1O15442 326 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 RAMP3O60896 148 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 EGR2P11161 476 aaPredicted RBP7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 MYOD1P15172 320 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 PHLDA2Q53GA4 152 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 ACTBL2Q562R1 376 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 C10orf55Q5SWW7 151 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 AADACL3Q5VUY0 350 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 LYSMD2Q8IV50 215 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 OR52I2Q8NH67 350 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 GPX8Q8TED1 209 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 DDB2Q92466 427 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 ARPC1AQ92747 370 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 TINAGL1Q9GZM7 467 aaPredicted RBP7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 MIXL1Q9H2W2 232 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 KLK11Q9UBX7 282 aa7.05□□□□□ -1.28
GTF3C1-210ENST00000569394 PRELID3BQ9Y3B1 194 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms