RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 OR51J1Q9H342 316 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 CCL28Q9NRJ3 127 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 EHFQ9NZC4 300 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 FBXO7Q9Y3I1 522 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 ATP6V0E1O15342 81 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 RGS5O15539 181 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 PFDN1O60925 122 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 SLC22A5O76082 557 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 CSF1P09603 554 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 HLA-DMAP28067 261 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 RCVRNP35243 200 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 HRH1P35367 487 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 TAGLNQ01995 201 aaKnown RBP7.69□□□□□ -1.18
CLK3-220ENST00000567992 NSUN5P1Q3KNT7 163 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 RNASE12Q5GAN4 147 aaKnown RBP7.69□□□□□ -1.18
CLK3-220ENST00000567992 LIN54Q6MZP7 749 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 DHRS11Q6UWP2 260 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 KCTD9Q7L273 389 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 MINDY2Q8NBR6 621 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 OR4X2Q8NGF9 303 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 OR6Q1Q8NGQ2 317 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 OR5H2Q8NGV7 314 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 OR52I2Q8NH67 350 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 SECTM1Q8WVN6 248 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 MOB3AQ96BX8 217 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 FLYWCH2Q96CP2 140 aaKnown RBP7.69□□□□□ -1.18
CLK3-220ENST00000567992 HARBI1Q96MB7 349 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 TSNAXQ99598 290 aaKnown RBP7.69□□□□□ -1.18
CLK3-220ENST00000567992 MMP27Q9H306 513 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 KIAA1456Q9P272 454 aa7.69□□□□□ -1.18
CLK3-220ENST00000567992 METTL1Q9UBP6 276 aaKnown RBP7.69□□□□□ -1.18
CLK3-220ENST00000567992 G3V318 75 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 SLC25A17O43808 307 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 CRYZL1O95825 349 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 CA2P00918 260 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 RRASP10301 218 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 EGR2P11161 476 aaPredicted RBP7.68□□□□□ -1.18
CLK3-220ENST00000567992 PPIFP30405 207 aaKnown RBP7.68□□□□□ -1.18
CLK3-220ENST00000567992 CRIP2P52943 208 aaPredicted RBP7.68□□□□□ -1.18
CLK3-220ENST00000567992 FXYD4P59646 89 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 RPS16P62249 146 aaKnown RBP7.68□□□□□ -1.18
CLK3-220ENST00000567992 CX3CL1P78423 397 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 DGCR2P98153 550 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 RTL8BQ17RB0 113 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 RGS21Q2M5E4 152 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 OR2B11Q5JQS5 317 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 ZNF818PQ6ZRF7 136 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 TMEM17Q86X19 198 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 MFSD4AQ8N468 514 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 RNF152Q8N8N0 203 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 MYOZ3Q8TDC0 251 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 HSD17B10Q99714 261 aaKnown RBP7.68□□□□□ -1.18
CLK3-220ENST00000567992 SOSTQ9BQB4 213 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 ZNF2Q9BSG1 426 aaPredicted RBP7.68□□□□□ -1.18
CLK3-220ENST00000567992 C6orf62Q9GZU0 229 aaPredicted RBP7.68□□□□□ -1.18
CLK3-220ENST00000567992 SLC5A7Q9GZV3 580 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 PARP11Q9NR21 331 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 TAS2R8Q9NYW2 309 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 KLK11Q9UBX7 282 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 MTFP1Q9UDX5 166 aa7.68□□□□□ -1.18
CLK3-220ENST00000567992 A0A1W2PRX2 142 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 TCRBV4S1A1TA0A5B7 111 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 GABARAPH6UMI1 98 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 ARPC1BO15143 372 aaKnown RBP7.67□□□□□ -1.18
CLK3-220ENST00000567992 SHOXO15266 292 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 TNFSF12O43508 249 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 SOX15O60248 233 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 FCGR3BO75015 233 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 IGLV1-40P01703 118 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 IGHG4P01861 327 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 GNRHRP30968 328 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 LGALS7P47929 136 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 UBE2KP61086 200 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 RPL23AP62750 156 aaKnown RBP7.67□□□□□ -1.18
CLK3-220ENST00000567992 SLC35B1P78383 322 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 PJVKQ0ZLH3 352 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 VAX1Q5SQQ9 334 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 ZNF66Q6ZN08 573 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 LCNL1Q6ZST4 164 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 C18orf65Q6ZTR6 163 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 PPP1R27Q86WC6 154 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 CENPSQ8N2Z9 138 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 COMMD1Q8N668 190 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 ZBTB34Q8NCN2 500 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 MCFD2Q8NI22 146 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 OSR1Q8TAX0 266 aaPredicted RBP7.67□□□□□ -1.18
CLK3-220ENST00000567992 FAM110DQ8TAY7 271 aaPredicted RBP7.67□□□□□ -1.18
CLK3-220ENST00000567992 SMIM4Q8WVI0 70 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 TCTEX1D2Q8WW35 142 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 CLCC1Q96S66 551 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 TINAGL1Q9GZM7 467 aaPredicted RBP7.67□□□□□ -1.18
CLK3-220ENST00000567992 TSSC4Q9Y5U2 329 aaPredicted RBP7.67□□□□□ -1.18
CLK3-220ENST00000567992 WSB1Q9Y6I7 421 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 TNCP24821 2201 aa7.67□□□□□ -1.18
CLK3-220ENST00000567992 PRKDCP78527 4128 aaKnown RBP7.66□□□□□ -1.18
CLK3-220ENST00000567992 hCG_2014768A0A024R1R8 64 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 TRAV41A0A0B4J266 112 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 M0QYG6 137 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 CTDSPLO15194 276 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 RAMP3O60896 148 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms