RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 ST8SIA5O15466 376 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 KRT36O76013 467 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 FAM107AO95990 144 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 FABP3P05413 133 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 RCC1P18754 421 aaPredicted RBP6.16□□□□□ -1.42
SMPD3-206ENST00000566009 LY6G6FQ5SQ64 297 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 C6orf183Q5T699 404 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 DMKNQ6E0U4 476 aaPredicted RBP6.16□□□□□ -1.42
SMPD3-206ENST00000566009 SSX9Q7RTT3 188 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 ARHGAP24Q8N264 748 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 DRAXINQ8NBI3 349 aaPredicted RBP6.16□□□□□ -1.42
SMPD3-206ENST00000566009 OR2AK2Q8NG84 335 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 TAF9BQ9HBM6 251 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 TNFRSF18Q9Y5U5 241 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 V9GYQ6 96 aa6.16□□□□□ -1.42
SMPD3-206ENST00000566009 ANKRD65E5RJM6 399 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 DFFBO76075 338 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 OR7C1O76099 320 aaPredicted RBP6.15□□□□□ -1.42
SMPD3-206ENST00000566009 C1QBP02746 253 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 RRM2P31350 389 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 TNXAQ16473 311 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 PLET1Q6UQ28 207 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 CYP2R1Q6VVX0 501 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 C19orf35Q6ZS72 473 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 PRSS35Q8N3Z0 413 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 STX19Q8N4C7 294 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 CCDC197Q8NCU1 140 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 NEK7Q8TDX7 302 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 FGGYQ96C11 551 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 IFT22Q9H7X7 185 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 SLC35D1Q9NTN3 355 aa6.15□□□□□ -1.42
SMPD3-206ENST00000566009 PUS1Q9Y606 427 aaKnown RBP eCLIP6.15□□□□□ -1.42
SMPD3-206ENST00000566009 TNFRSF11BO00300 401 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 ZNF207O43670 478 aaKnown RBP6.14□□□□□ -1.43
SMPD3-206ENST00000566009 RPP14O95059 124 aaKnown RBP6.14□□□□□ -1.43
SMPD3-206ENST00000566009 GASTP01350 101 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 MT-ND2P03891 347 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 MRPL3P09001 348 aaKnown RBP6.14□□□□□ -1.43
SMPD3-206ENST00000566009 CALB2P22676 271 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 GPR183P32249 361 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 HNRNPA3P51991 378 aaKnown RBP6.14□□□□□ -1.43
SMPD3-206ENST00000566009 ACTR3P61158 418 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 RPS7P62081 194 aaKnown RBP6.14□□□□□ -1.43
SMPD3-206ENST00000566009 MS4A2Q01362 244 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 ZNF322Q6U7Q0 402 aaPredicted RBP6.14□□□□□ -1.43
SMPD3-206ENST00000566009 DHFR2Q86XF0 187 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 PDPNQ86YL7 162 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 MFSD4AQ8N468 514 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 IQCF1Q8N6M8 205 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 ZNF383Q8NA42 475 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 OR9Q2Q8NGE9 314 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 OR10K1Q8NGX5 313 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 OR10AC1Q8NH08 325 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 ABHD14BQ96IU4 210 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 FANCD2OSQ96PS1 177 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 OR2A7Q96R45 310 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 NEU1Q99519 415 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 UPK3BQ9BT76 320 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 SMPXQ9UHP9 88 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 ST3GAL6Q9Y274 331 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 ZNF257Q9Y2Q1 563 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 TMEM14AQ9Y6G1 99 aa6.14□□□□□ -1.43
SMPD3-206ENST00000566009 TRBV7-1A0A0A6YYK4 115 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 K7EMT4 169 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 MAS1P04201 325 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 DAD1P61803 113 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 PAFAH1B2P68402 229 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 GK3PQ14409 553 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 FAM98BQ52LJ0 330 aaKnown RBP6.13□□□□□ -1.43
SMPD3-206ENST00000566009 SLC35D3Q5M8T2 416 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 FAM90A2PQ658T7 463 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 TRAT1Q6PIZ9 186 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 SLC25A42Q86VD7 318 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 FAM24BQ8N5W8 94 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 PXT1Q8NFP0 134 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 EDARADDQ8WWZ3 215 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 UHRF2Q96PU4 802 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 THTPAQ9BU02 230 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 C20orf24Q9BUV8 137 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 MAGIXQ9H6Y5 334 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 HSF4Q9ULV5 492 aa6.13□□□□□ -1.43
SMPD3-206ENST00000566009 IGHV3OR16-8A0A075B7F1 116 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 LOC107986453A0A1B0GWG9 222 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 TCRBV5S2A0A599 114 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 MFSD2BA6NFX1 497 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 KNCNA6PVL3 124 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 SRRM4A7MD48 611 aaKnown RBP6.12□□□□□ -1.43
SMPD3-206ENST00000566009 CHEK1O14757 476 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 GEMIN2O14893 280 aaKnown RBP6.12□□□□□ -1.43
SMPD3-206ENST00000566009 CCNB2O95067 398 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 GNRHRP30968 328 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 CXCR4P61073 352 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 PPP1R8Q12972 351 aaKnown RBP6.12□□□□□ -1.43
SMPD3-206ENST00000566009 KISS1Q15726 138 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 PRSS8Q16651 343 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 OR2T5Q6IEZ7 315 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 ZNF705AQ6ZN79 300 aaPredicted RBP6.12□□□□□ -1.43
SMPD3-206ENST00000566009 Q6ZSA8 131 aa6.12□□□□□ -1.43
SMPD3-206ENST00000566009 BCDIN3DQ7Z5W3 292 aaKnown RBP6.12□□□□□ -1.43
SMPD3-206ENST00000566009 CPOQ8IVL8 374 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms