RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 APOA2P02652 100 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 GAPDHP04406 335 aaKnown RBP12.73□□□□□ -0.37
COMMD4-210ENST00000564587 G6PCP35575 357 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 POLR2GP62487 172 aaKnown RBP eCLIP12.73□□□□□ -0.37
COMMD4-210ENST00000564587 BAXQ07812 192 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 EIF5AL1Q6IS14 154 aaKnown RBP12.73□□□□□ -0.37
COMMD4-210ENST00000564587 ABHD12Q8N2K0 398 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 CCL19Q99731 98 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 PCGF1Q9BSM1 259 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 GSX2Q9BZM3 304 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 LYRM2Q9NU23 88 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-210ENST00000564587 WSB1Q9Y6I7 421 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 PTPN13Q12923 2485 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 MSGN1A6NI15 193 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 KIAA1324LA8MWY0 1029 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-210ENST00000564587 CHST1O43916 411 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 SSSCA1O60232 199 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 JTBO76095 146 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 HTR2BP41595 481 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 POU2AF1Q16633 256 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 CLLU1Q5K131 121 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 Q6ZRM9 215 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 OR8H3Q8N146 312 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 C11orf42Q8N5U0 333 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 BEND2Q8NDZ0 799 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 SMIM8Q96KF7 97 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 CLEC7AQ9BXN2 247 aa12.72□□□□□ -0.37
COMMD4-210ENST00000564587 AMMECR1Q9Y4X0 333 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-210ENST00000564587 BORCS7-ASMTA0A0B4J1R7 106 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 NDUFS8O00217 210 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 SCAF4O95104 1147 aaKnown RBP12.71□□□□□ -0.37
COMMD4-210ENST00000564587 SPDEFO95238 335 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 CFDP00746 253 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-210ENST00000564587 RNF224P0DH78 156 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 CT45A6P0DMU7 189 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 CT45A5P0DMU8 189 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 CT45A7P0DMV0 189 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 MIDNQ504T8 468 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 BAP18Q8IXM2 172 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 KIR3DL3Q8N743 410 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 ZNF383Q8NA42 475 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 OR13D1Q8NGV5 346 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 LRRC20Q8TCA0 184 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 CIB3Q96Q77 187 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-210ENST00000564587 MAGT1Q9H0U3 335 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 SLC35D1Q9NTN3 355 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 HSPB7Q9UBY9 170 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 MALRD1Q5VYJ5 2156 aa12.71□□□□□ -0.37
COMMD4-210ENST00000564587 DOPEY1Q5JWR5 2465 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 TXNL1O43396 289 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 ENSAO43768 121 aaKnown RBP12.7□□□□□ -0.38
COMMD4-210ENST00000564587 IGHV2-5P01817 119 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 MC5RP33032 325 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 CAV2P51636 162 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 TNFRSF9Q07011 255 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 AARDQ4LEZ3 155 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 UTF1Q5T230 341 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 SP5Q6BEB4 398 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-210ENST00000564587 TMEM252Q8N6L7 170 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 OR52E5Q8NH55 327 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 OR4A16Q8NH70 328 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 OSR1Q8TAX0 266 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-210ENST00000564587 ST6GALNAC6Q969X2 333 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 MARVELD3Q96A59 401 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 SLC25A32Q9H2D1 315 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 CYTL1Q9NRR1 136 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 ARID1AO14497 2285 aa12.7□□□□□ -0.38
COMMD4-210ENST00000564587 IGHV2-26A0A0B4J1V2 119 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 A8MXK9 166 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 C22orf46C9J442 243 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 KCNAB3O43448 404 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 NDUFS7O75251 213 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 RBMXL2O75526 392 aaKnown RBP12.69□□□□□ -0.38
COMMD4-210ENST00000564587 CRYZL1O95825 349 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 RAB13P51153 203 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 UBE2KP61086 200 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 EWSR1Q01844 656 aaKnown RBP eCLIP12.69□□□□□ -0.38
COMMD4-210ENST00000564587 C1orf229Q6ZS94 237 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-210ENST00000564587 STX12Q86Y82 276 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 PDPNQ86YL7 162 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 TGIF2LXQ8IUE1 241 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 UBAC2Q8NBM4 344 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 OR5AN1Q8NGI8 311 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 ONECUT1Q9UBC0 465 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 FBXL17Q9UF56 701 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 ADGRG4Q8IZF6 3080 aa12.69□□□□□ -0.38
COMMD4-210ENST00000564587 MYO9AB2RTY4 2548 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 FAM24AA6NFZ4 105 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 ATP6V1G1O75348 118 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 IGLV1-47P01700 117 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 IGHV4-39P01824 125 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 DSCR9P59020 149 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 LINC00205P59089 165 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 ZNF266Q14584 549 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 IZUMO4Q1ZYL8 232 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 HLA-DRB5Q30154 266 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 ALKAL2Q6UX46 152 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 ZNF429Q86V71 674 aa12.68□□□□□ -0.38
COMMD4-210ENST00000564587 CLCC1Q96S66 551 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms