RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 H1FOOQ8IZA3 346 aaPredicted RBP11.55□□□□□ -0.56
SPG7-210ENST00000564409 TEX45Q8NA69 505 aa11.55□□□□□ -0.56
SPG7-210ENST00000564409 FCGR1BQ92637 280 aa11.55□□□□□ -0.56
SPG7-210ENST00000564409 USMG5Q96IX5 58 aa11.55□□□□□ -0.56
SPG7-210ENST00000564409 STUB1Q9UNE7 303 aa11.55□□□□□ -0.56
SPG7-210ENST00000564409 DNAH9Q9NYC9 4486 aa11.54□□□□□ -0.56
SPG7-210ENST00000564409 SHISA3A0PJX4 238 aa11.54□□□□□ -0.56
SPG7-210ENST00000564409 CREBL2O60519 120 aaPredicted RBP11.54□□□□□ -0.56
SPG7-210ENST00000564409 GP9P14770 177 aa11.54□□□□□ -0.56
SPG7-210ENST00000564409 SPNP16150 400 aa11.54□□□□□ -0.56
SPG7-210ENST00000564409 VMA21Q3ZAQ7 101 aa11.54□□□□□ -0.56
SPG7-210ENST00000564409 UBE2UQ5VVX9 321 aa11.54□□□□□ -0.56
SPG7-210ENST00000564409 OSR1Q8TAX0 266 aaPredicted RBP11.54□□□□□ -0.56
SPG7-210ENST00000564409 ATG5Q9H1Y0 275 aa11.54□□□□□ -0.56
SPG7-210ENST00000564409 DCSTAMPQ9H295 470 aa11.54□□□□□ -0.56
SPG7-210ENST00000564409 A0A075B6Q4 140 aa11.53□□□□□ -0.56
SPG7-210ENST00000564409 NOTOA8MTQ0 251 aa11.53□□□□□ -0.56
SPG7-210ENST00000564409 C3orf84H3BNL1 204 aa11.53□□□□□ -0.56
SPG7-210ENST00000564409 UBE2KP61086 200 aa11.53□□□□□ -0.56
SPG7-210ENST00000564409 SSBP2P81877 361 aaPredicted RBP11.53□□□□□ -0.56
SPG7-210ENST00000564409 C22orf42Q6IC83 251 aa11.53□□□□□ -0.56
SPG7-210ENST00000564409 BVESQ8NE79 360 aa11.53□□□□□ -0.56
SPG7-210ENST00000564409 OR5T1Q8NG75 326 aa11.53□□□□□ -0.56
SPG7-210ENST00000564409 DDB2Q92466 427 aa11.53□□□□□ -0.56
SPG7-210ENST00000564409 YTHDF1Q9BYJ9 559 aaKnown RBP11.53□□□□□ -0.56
SPG7-210ENST00000564409 TINAGL1Q9GZM7 467 aaPredicted RBP11.53□□□□□ -0.56
SPG7-210ENST00000564409 Q9H521 79 aa11.53□□□□□ -0.56
SPG7-210ENST00000564409 ZNF230Q9UIE0 474 aaPredicted RBP11.53□□□□□ -0.56
SPG7-210ENST00000564409 IGLV1-51P01701 117 aa11.52□□□□□ -0.57
SPG7-210ENST00000564409 DUTP33316 252 aaKnown RBP11.52□□□□□ -0.57
SPG7-210ENST00000564409 PJVKQ0ZLH3 352 aa11.52□□□□□ -0.57
SPG7-210ENST00000564409 CDNFQ49AH0 187 aa11.52□□□□□ -0.57
SPG7-210ENST00000564409 HACD4Q5VWC8 232 aa11.52□□□□□ -0.57
SPG7-210ENST00000564409 ANKRD13BQ86YJ7 626 aa11.52□□□□□ -0.57
SPG7-210ENST00000564409 ASCL2Q99929 193 aa11.52□□□□□ -0.57
SPG7-210ENST00000564409 CD36P16671 472 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 SCAND1P57086 179 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 KLF5Q13887 457 aaPredicted RBP11.51□□□□□ -0.57
SPG7-210ENST00000564409 PRSS8Q16651 343 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 TATDN3Q17R31 274 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 FAM209BQ5JX69 171 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 ZNF343Q6P1L6 599 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 ZNF645Q8N7E2 425 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 MAFIPQ8WZ33 124 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 TXNL4BQ9NX01 149 aaKnown RBP11.51□□□□□ -0.57
SPG7-210ENST00000564409 PEF1Q9UBV8 284 aaKnown RBP11.51□□□□□ -0.57
SPG7-210ENST00000564409 PRELID3BQ9Y3B1 194 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 OR2W1Q9Y3N9 320 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 STAB2Q8WWQ8 2551 aa11.51□□□□□ -0.57
SPG7-210ENST00000564409 NBEAL2Q6ZNJ1 2754 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 MSGN1A6NI15 193 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 SRRM4A7MD48 611 aaKnown RBP11.5□□□□□ -0.57
SPG7-210ENST00000564409 A8MZ25 164 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 H0Y980 276 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 ACTL6BO94805 426 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 CRYZL1O95825 349 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 OR9G9P0C7N8 305 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 SNRPBP14678 240 aaKnown RBP11.5□□□□□ -0.57
SPG7-210ENST00000564409 CNIH2Q6PI25 160 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 NR2C2APQ86WQ0 139 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 SBSPONQ8IVN8 264 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 SPARTQ8N0X7 666 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 C5orf30Q96GV9 206 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 PHB2Q99623 299 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 SPIN2AQ99865 258 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 SPIN2BQ9BPZ2 258 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 ST6GALNAC5Q9BVH7 336 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 ZMAT4Q9H898 229 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 COA4Q9NYJ1 87 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 SIGLEC8Q9NYZ4 499 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 SSR3Q9UNL2 185 aa11.5□□□□□ -0.57
SPG7-210ENST00000564409 MRPS7Q9Y2R9 242 aaKnown RBP11.5□□□□□ -0.57
SPG7-210ENST00000564409 A0A0B4J203 849 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 FAM223BA6NKX1 122 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 LINC00473A8K010 186 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 HLA-DQB1P01920 261 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 FRMD6-AS1P0C7T7 363 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 PSMB9P28065 219 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 CDK10Q15131 360 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 TNXAQ16473 311 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 OVCH2Q7RTZ1 564 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 SLC25A42Q86VD7 318 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 FAM223AQ8IWN6 122 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 MMD2Q8IY49 270 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 ADAD2Q8NCV1 583 aaKnown RBP11.49□□□□□ -0.57
SPG7-210ENST00000564409 OR9G4Q8NGQ1 327 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 SRSF12Q8WXF0 261 aaKnown RBP11.49□□□□□ -0.57
SPG7-210ENST00000564409 SNAPC3Q92966 411 aa11.49□□□□□ -0.57
SPG7-210ENST00000564409 HSD17B10Q99714 261 aaKnown RBP11.49□□□□□ -0.57
SPG7-210ENST00000564409 IGKV1D-8A0A087WSZ0 117 aa11.48□□□□□ -0.57
SPG7-210ENST00000564409 ANKRD34BA5PLL1 514 aa11.48□□□□□ -0.57
SPG7-210ENST00000564409 MPPED1O15442 326 aa11.48□□□□□ -0.57
SPG7-210ENST00000564409 OR2A4O95047 310 aa11.48□□□□□ -0.57
SPG7-210ENST00000564409 GNG2P59768 71 aa11.48□□□□□ -0.57
SPG7-210ENST00000564409 DYRK1AQ13627 763 aa11.48□□□□□ -0.57
SPG7-210ENST00000564409 MRGPRG-AS1Q2M3A8 158 aa11.48□□□□□ -0.57
SPG7-210ENST00000564409 KCTD9Q7L273 389 aa11.48□□□□□ -0.57
SPG7-210ENST00000564409 VSTM2AQ8TAG5 236 aa11.48□□□□□ -0.57
SPG7-210ENST00000564409 RCHY1Q96PM5 261 aa11.48□□□□□ -0.57
SPG7-210ENST00000564409 RSRP1Q9BUV0 290 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms