RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 RAB9AP51151 201 aa23.95■■□□□ 1.42
CMTM4-204ENST00000563952 FXYD3Q14802 87 aa23.95■■□□□ 1.42
CMTM4-204ENST00000563952 ZNF491Q8N8L2 437 aa23.95■■□□□ 1.42
CMTM4-204ENST00000563952 CASTOR1Q8WTX7 329 aa23.95■■□□□ 1.42
CMTM4-204ENST00000563952 ARPC1AQ92747 370 aa23.95■■□□□ 1.42
CMTM4-204ENST00000563952 UBE2E2Q96LR5 201 aa23.95■■□□□ 1.42
CMTM4-204ENST00000563952 OR5B12Q96R08 314 aa23.95■■□□□ 1.42
CMTM4-204ENST00000563952 GNB4Q9HAV0 340 aa23.95■■□□□ 1.42
CMTM4-204ENST00000563952 AURKAIP1Q9NWT8 199 aaPredicted RBP23.95■■□□□ 1.42
CMTM4-204ENST00000563952 MEIS3P1A6NDR6 274 aa23.94■■□□□ 1.42
CMTM4-204ENST00000563952 CRYZL1O95825 349 aa23.94■■□□□ 1.42
CMTM4-204ENST00000563952 KIAA0141Q14154 515 aaPredicted RBP23.94■■□□□ 1.42
CMTM4-204ENST00000563952 ACTBL2Q562R1 376 aa23.94■■□□□ 1.42
CMTM4-204ENST00000563952 TCTEX1D1Q8N7M0 179 aa23.94■■□□□ 1.42
CMTM4-204ENST00000563952 LFNGQ8NES3 379 aa23.94■■□□□ 1.42
CMTM4-204ENST00000563952 VSIG4Q9Y279 399 aa23.94■■□□□ 1.42
CMTM4-204ENST00000563952 RBMX2Q9Y388 322 aaKnown RBP23.94■■□□□ 1.42
CMTM4-204ENST00000563952 SRRM4A7MD48 611 aaKnown RBP23.93■■□□□ 1.42
CMTM4-204ENST00000563952 ARPC1BO15143 372 aaKnown RBP23.93■■□□□ 1.42
CMTM4-204ENST00000563952 CNIH1O95406 144 aa23.93■■□□□ 1.42
CMTM4-204ENST00000563952 PJVKQ0ZLH3 352 aa23.93■■□□□ 1.42
CMTM4-204ENST00000563952 MCRIP2Q9BUT9 160 aaKnown RBP23.93■■□□□ 1.42
CMTM4-204ENST00000563952 SLC22A5O76082 557 aa23.92■■□□□ 1.42
CMTM4-204ENST00000563952 CRYGBP07316 175 aa23.92■■□□□ 1.42
CMTM4-204ENST00000563952 HOXD3P31249 432 aaPredicted RBP23.92■■□□□ 1.42
CMTM4-204ENST00000563952 CBX5P45973 191 aa23.92■■□□□ 1.42
CMTM4-204ENST00000563952 TMEM69Q5SWH9 247 aa23.92■■□□□ 1.42
CMTM4-204ENST00000563952 KCTD9Q7L273 389 aa23.92■■□□□ 1.42
CMTM4-204ENST00000563952 GPR61Q9BZJ8 451 aa23.92■■□□□ 1.42
CMTM4-204ENST00000563952 IGLV2-14P01704 120 aa23.91■■□□□ 1.42
CMTM4-204ENST00000563952 FCGR2CP31995 323 aa23.91■■□□□ 1.42
CMTM4-204ENST00000563952 TAS2R20P59543 309 aa23.91■■□□□ 1.42
CMTM4-204ENST00000563952 AKIRIN2Q53H80 203 aa23.91■■□□□ 1.42
CMTM4-204ENST00000563952 OR2B11Q5JQS5 317 aa23.91■■□□□ 1.42
CMTM4-204ENST00000563952 OR11H1Q8NG94 326 aa23.91■■□□□ 1.42
CMTM4-204ENST00000563952 MRAPQ8TCY5 172 aa23.91■■□□□ 1.42
CMTM4-204ENST00000563952 KCTD12Q96CX2 325 aaKnown RBP23.91■■□□□ 1.42
CMTM4-204ENST00000563952 DCUN1D5Q9BTE7 237 aa23.91■■□□□ 1.42
CMTM4-204ENST00000563952 IFT46Q9NQC8 304 aa23.91■■□□□ 1.42
CMTM4-204ENST00000563952 COMMD3Q9UBI1 195 aa23.91■■□□□ 1.42
CMTM4-204ENST00000563952 FCGR3BO75015 233 aa23.9■■□□□ 1.42
CMTM4-204ENST00000563952 AADACP22760 399 aa23.9■■□□□ 1.42
CMTM4-204ENST00000563952 VMA21Q3ZAQ7 101 aa23.9■■□□□ 1.42
CMTM4-204ENST00000563952 OR5M8Q8NGP6 311 aa23.9■■□□□ 1.42
CMTM4-204ENST00000563952 DPF1Q92782 380 aa23.9■■□□□ 1.42
CMTM4-204ENST00000563952 SNAPC3Q92966 411 aa23.9■■□□□ 1.42
CMTM4-204ENST00000563952 NAA50Q9GZZ1 169 aaKnown RBP23.9■■□□□ 1.42
CMTM4-204ENST00000563952 PRELID3BQ9Y3B1 194 aa23.9■■□□□ 1.42
CMTM4-204ENST00000563952 RPL30P62888 115 aaKnown RBP23.89■■□□□ 1.41
CMTM4-204ENST00000563952 SSBP2P81877 361 aaPredicted RBP23.89■■□□□ 1.41
CMTM4-204ENST00000563952 OSR1Q8TAX0 266 aaPredicted RBP23.89■■□□□ 1.41
CMTM4-204ENST00000563952 SECTM1Q8WVN6 248 aa23.89■■□□□ 1.41
CMTM4-204ENST00000563952 MS4A10Q96PG2 267 aa23.89■■□□□ 1.41
CMTM4-204ENST00000563952 PRKDCP78527 4128 aaKnown RBP23.88■■□□□ 1.41
CMTM4-204ENST00000563952 I3L521 148 aa23.88■■□□□ 1.41
CMTM4-204ENST00000563952 EIF4EP06730 217 aaKnown RBP23.88■■□□□ 1.41
CMTM4-204ENST00000563952 KRTAP10-11P60412 298 aa23.88■■□□□ 1.41
CMTM4-204ENST00000563952 UBE2KP61086 200 aa23.88■■□□□ 1.41
CMTM4-204ENST00000563952 PYHIN1Q6K0P9 492 aa23.88■■□□□ 1.41
CMTM4-204ENST00000563952 IDO2Q6ZQW0 420 aa23.88■■□□□ 1.41
CMTM4-204ENST00000563952 OR1N2Q8NGR9 330 aa23.88■■□□□ 1.41
CMTM4-204ENST00000563952 TCTEX1D2Q8WW35 142 aa23.88■■□□□ 1.41
CMTM4-204ENST00000563952 MRPS7Q9Y2R9 242 aaKnown RBP23.88■■□□□ 1.41
CMTM4-204ENST00000563952 CD40LGP29965 261 aa23.87■■□□□ 1.41
CMTM4-204ENST00000563952 FHL3Q13643 280 aa23.87■■□□□ 1.41
CMTM4-204ENST00000563952 OR5AP2Q8NGF4 316 aa23.87■■□□□ 1.41
CMTM4-204ENST00000563952 HSD17B10Q99714 261 aaKnown RBP23.87■■□□□ 1.41
CMTM4-204ENST00000563952 ALX4Q9H161 411 aaPredicted RBP23.87■■□□□ 1.41
CMTM4-204ENST00000563952 TAS2R8Q9NYW2 309 aa23.87■■□□□ 1.41
CMTM4-204ENST00000563952 TGP01266 2768 aa23.86■■□□□ 1.41
CMTM4-204ENST00000563952 PPYP01298 95 aa23.86■■□□□ 1.41
CMTM4-204ENST00000563952 TPPP2P59282 170 aa23.86■■□□□ 1.41
CMTM4-204ENST00000563952 RUNX1Q01196 453 aa23.86■■□□□ 1.41
CMTM4-204ENST00000563952 OVCH2Q7RTZ1 564 aa23.86■■□□□ 1.41
CMTM4-204ENST00000563952 ANKRD13BQ86YJ7 626 aa23.86■■□□□ 1.41
CMTM4-204ENST00000563952 TEX45Q8NA69 505 aa23.86■■□□□ 1.41
CMTM4-204ENST00000563952 MRPS26Q9BYN8 205 aaKnown RBP23.86■■□□□ 1.41
CMTM4-204ENST00000563952 CCL28Q9NRJ3 127 aa23.86■■□□□ 1.41
CMTM4-204ENST00000563952 ZNF355PQ9NSJ1 428 aa23.86■■□□□ 1.41
CMTM4-204ENST00000563952 FXYD4P59646 89 aa23.85■■□□□ 1.41
CMTM4-204ENST00000563952 ZNF616Q08AN1 781 aa23.85■■□□□ 1.41
CMTM4-204ENST00000563952 CDK10Q15131 360 aa23.85■■□□□ 1.41
CMTM4-204ENST00000563952 GPR107Q5VW38 600 aa23.85■■□□□ 1.41
CMTM4-204ENST00000563952 OR5T1Q8NG75 326 aa23.85■■□□□ 1.41
CMTM4-204ENST00000563952 GPHA2Q96T91 129 aa23.85■■□□□ 1.41
CMTM4-204ENST00000563952 TNFSF12O43508 249 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 GABARAPO95166 117 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 OR8U8P0C7N1 319 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 SAA1P0DJI8 122 aaPredicted RBP23.84■■□□□ 1.41
CMTM4-204ENST00000563952 RORCP51449 518 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 EGFEM1PQ0D2K5 195 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 EIF4EBP1Q13541 118 aaPredicted RBP23.84■■□□□ 1.41
CMTM4-204ENST00000563952 TNXAQ16473 311 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 CTF1Q16619 201 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 PRSS8Q16651 343 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 MRGPRG-AS1Q2M3A8 158 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 MFSD4AQ8N468 514 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 PHB2Q99623 299 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 SLC5A7Q9GZV3 580 aa23.84■■□□□ 1.41
CMTM4-204ENST00000563952 IGHV3-11P01762 117 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms