RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 C13orf42A0A1B0GVH6 325 aa13.64□□□□□ -0.23
NME3-205ENST00000563854 TMEM235A6NFC5 223 aa13.64□□□□□ -0.23
NME3-205ENST00000563854 DIRAS3O95661 229 aa13.64□□□□□ -0.23
NME3-205ENST00000563854 CRYZL1O95825 349 aa13.64□□□□□ -0.23
NME3-205ENST00000563854 HSPB1P04792 205 aaKnown RBP13.64□□□□□ -0.23
NME3-205ENST00000563854 DTYMKP23919 212 aa13.64□□□□□ -0.23
NME3-205ENST00000563854 FGF9P31371 208 aaPredicted RBP13.64□□□□□ -0.23
NME3-205ENST00000563854 MXD1Q05195 221 aa13.64□□□□□ -0.23
NME3-205ENST00000563854 POC5Q8NA72 575 aa13.64□□□□□ -0.23
NME3-205ENST00000563854 OR51E2Q9H255 320 aa13.64□□□□□ -0.23
NME3-205ENST00000563854 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.64□□□□□ -0.23
NME3-205ENST00000563854 ANKRD34BA5PLL1 514 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 RRASP10301 218 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 NFYAP23511 347 aaPredicted RBP13.63□□□□□ -0.23
NME3-205ENST00000563854 GNG2P59768 71 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 SSBP2P81877 361 aaPredicted RBP13.63□□□□□ -0.23
NME3-205ENST00000563854 VMA21Q3ZAQ7 101 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 TMEM177Q53S58 311 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 OR2B11Q5JQS5 317 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 HACD4Q5VWC8 232 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 SFXN4Q6P4A7 337 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 ZNF773Q6PK81 442 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 IDO2Q6ZQW0 420 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 ADTRPQ96IZ2 230 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 RHOVQ96L33 236 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 CENPOQ9BU64 300 aa13.63□□□□□ -0.23
NME3-205ENST00000563854 LOC100506127A0A0U1RQW1 187 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 SRRM4A7MD48 611 aaKnown RBP13.62□□□□□ -0.23
NME3-205ENST00000563854 LINC00473A8K010 186 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 CRYGBP07316 175 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 CLEC2LP0C7M8 214 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 SPNP16150 400 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 DUTP33316 252 aaKnown RBP13.62□□□□□ -0.23
NME3-205ENST00000563854 TAGLNQ01995 201 aaKnown RBP13.62□□□□□ -0.23
NME3-205ENST00000563854 TNXAQ16473 311 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 SRSF7Q16629 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
NME3-205ENST00000563854 Q6ZS49 121 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 HAPLN4Q86UW8 402 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 TPRA1Q86W33 373 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 ACOT12Q8WYK0 555 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 WWC2-AS2Q96NR7 200 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 OR4C12Q96R67 309 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 DCUN1D5Q9BTE7 237 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 RSRP1Q9BUV0 290 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 RNF167Q9H6Y7 350 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 COA4Q9NYJ1 87 aa13.62□□□□□ -0.23
NME3-205ENST00000563854 MPPED1O15442 326 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 TUSC2O75896 110 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 NHLRC4P0CG21 123 aaPredicted RBP13.61□□□□□ -0.23
NME3-205ENST00000563854 SDC2P34741 201 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 NEDD8Q15843 81 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 ACSM6Q6P461 480 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 KCTD9Q7L273 389 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 ZNF645Q8N7E2 425 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 OR6Q1Q8NGQ2 317 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 YTHDF1Q9BYJ9 559 aaKnown RBP13.61□□□□□ -0.23
NME3-205ENST00000563854 RHBDL2Q9NX52 303 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 SMAD5-AS1Q9Y6J3 95 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 U3KQK5 164 aa13.61□□□□□ -0.23
NME3-205ENST00000563854 H3BUA1 57 aa13.6□□□□□ -0.23
NME3-205ENST00000563854 FCGR3BO75015 233 aa13.6□□□□□ -0.23
NME3-205ENST00000563854 SCGNO76038 276 aa13.6□□□□□ -0.23
NME3-205ENST00000563854 IDNKQ5T6J7 187 aa13.6□□□□□ -0.23
NME3-205ENST00000563854 DDB2Q92466 427 aa13.6□□□□□ -0.23
NME3-205ENST00000563854 OR2W1Q9Y3N9 320 aa13.6□□□□□ -0.23
NME3-205ENST00000563854 A0A0G2JLM5 398 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 MSGN1A6NI15 193 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 SSX5O60225 188 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 CTXN2P0C2S0 81 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 GP9P14770 177 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 CD36P16671 472 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 UBE2KP61086 200 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 TEX45Q8NA69 505 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 ELOVL1Q9BW60 279 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 DCSTAMPQ9H295 470 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 RANGRFQ9HD47 186 aaPredicted RBP13.59□□□□□ -0.23
NME3-205ENST00000563854 PRELID3BQ9Y3B1 194 aa13.59□□□□□ -0.23
NME3-205ENST00000563854 IGKV1D-13A0A0B4J2D9 117 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 ACTL6BO94805 426 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 SAA1P0DJI8 122 aaPredicted RBP13.58□□□□□ -0.24
NME3-205ENST00000563854 IGKV1-13P0DP09 117 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 ZP3P21754 424 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 PRSS8Q16651 343 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 CNIH2Q6PI25 160 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 OVCH2Q7RTZ1 564 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 OR5H6Q8NGV6 325 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 OSR1Q8TAX0 266 aaPredicted RBP13.58□□□□□ -0.24
NME3-205ENST00000563854 TCTEX1D2Q8WW35 142 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 SRSF12Q8WXF0 261 aaKnown RBP13.58□□□□□ -0.24
NME3-205ENST00000563854 TMEM68Q96MH6 324 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 TINAGL1Q9GZM7 467 aaPredicted RBP13.58□□□□□ -0.24
NME3-205ENST00000563854 ANXA10Q9UJ72 324 aa13.58□□□□□ -0.24
NME3-205ENST00000563854 MRPS7Q9Y2R9 242 aaKnown RBP13.58□□□□□ -0.24
NME3-205ENST00000563854 RBMX2Q9Y388 322 aaKnown RBP13.58□□□□□ -0.24
NME3-205ENST00000563854 TRAV18A0A075B6X5 111 aa13.57□□□□□ -0.24
NME3-205ENST00000563854 FCER2P06734 321 aa13.57□□□□□ -0.24
NME3-205ENST00000563854 ARPC4P59998 168 aa13.57□□□□□ -0.24
NME3-205ENST00000563854 MRGPRG-AS1Q2M3A8 158 aa13.57□□□□□ -0.24
NME3-205ENST00000563854 C10orf55Q5SWW7 151 aa13.57□□□□□ -0.24
NME3-205ENST00000563854 ANKRD13BQ86YJ7 626 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms