RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 ZNF230Q9UIE0 474 aaPredicted RBP15.99■□□□□ 0.15
CHD9-208ENST00000563410 ADAM30Q9UKF2 790 aa15.99■□□□□ 0.15
CHD9-208ENST00000563410 DNAH1Q9P2D7 4330 aa15.99■□□□□ 0.15
CHD9-208ENST00000563410 MFNGO00587 321 aa15.98■□□□□ 0.15
CHD9-208ENST00000563410 RBMXL2O75526 392 aaKnown RBP15.98■□□□□ 0.15
CHD9-208ENST00000563410 TRBV12-3P01733 135 aa15.98■□□□□ 0.15
CHD9-208ENST00000563410 GNB3P16520 340 aa15.98■□□□□ 0.15
CHD9-208ENST00000563410 PSMD7P51665 324 aa15.98■□□□□ 0.15
CHD9-208ENST00000563410 MRPS15P82914 257 aaKnown RBP15.98■□□□□ 0.15
CHD9-208ENST00000563410 TAGLNQ01995 201 aaKnown RBP15.98■□□□□ 0.15
CHD9-208ENST00000563410 DYRK1AQ13627 763 aa15.98■□□□□ 0.15
CHD9-208ENST00000563410 ZNF343Q6P1L6 599 aa15.98■□□□□ 0.15
CHD9-208ENST00000563410 OR10R2Q8NGX6 335 aa15.98■□□□□ 0.15
CHD9-208ENST00000563410 DDB2Q92466 427 aa15.98■□□□□ 0.15
CHD9-208ENST00000563410 CCDC90BQ9GZT6 254 aa15.98■□□□□ 0.15
CHD9-208ENST00000563410 PEF1Q9UBV8 284 aaKnown RBP15.98■□□□□ 0.15
CHD9-208ENST00000563410 RAB27BO00194 218 aa15.97■□□□□ 0.15
CHD9-208ENST00000563410 SHOXO15266 292 aa15.97■□□□□ 0.15
CHD9-208ENST00000563410 RANBP1P43487 201 aa15.97■□□□□ 0.15
CHD9-208ENST00000563410 SYNJ2BPP57105 145 aa15.97■□□□□ 0.15
CHD9-208ENST00000563410 OR10A3P58181 314 aa15.97■□□□□ 0.15
CHD9-208ENST00000563410 SSX1Q16384 188 aa15.97■□□□□ 0.15
CHD9-208ENST00000563410 SGPP2Q8IWX5 399 aa15.97■□□□□ 0.15
CHD9-208ENST00000563410 THAP7Q9BT49 309 aaPredicted RBP15.97■□□□□ 0.15
CHD9-208ENST00000563410 EDA2RQ9HAV5 297 aa15.97■□□□□ 0.15
CHD9-208ENST00000563410 GAR1Q9NY12 217 aaKnown RBP15.97■□□□□ 0.15
CHD9-208ENST00000563410 LINC00473A8K010 186 aa15.96■□□□□ 0.15
CHD9-208ENST00000563410 APELAP0DMC3 54 aa15.96■□□□□ 0.15
CHD9-208ENST00000563410 HIST1H1DP16402 221 aaKnown RBP15.96■□□□□ 0.15
CHD9-208ENST00000563410 AADACP22760 399 aa15.96■□□□□ 0.15
CHD9-208ENST00000563410 DUTP33316 252 aaKnown RBP15.96■□□□□ 0.15
CHD9-208ENST00000563410 RTL8BQ17RB0 113 aa15.96■□□□□ 0.15
CHD9-208ENST00000563410 ADAD2Q8NCV1 583 aaKnown RBP15.96■□□□□ 0.15
CHD9-208ENST00000563410 COA4Q9NYJ1 87 aa15.96■□□□□ 0.15
CHD9-208ENST00000563410 A0A075B6Q4 140 aa15.95■□□□□ 0.14
CHD9-208ENST00000563410 IGKV1D-8A0A087WSZ0 117 aa15.95■□□□□ 0.14
CHD9-208ENST00000563410 TRAV1-2A0A0B4J238 106 aa15.95■□□□□ 0.14
CHD9-208ENST00000563410 MSGN1A6NI15 193 aa15.95■□□□□ 0.14
CHD9-208ENST00000563410 CSN3P07498 182 aa15.95■□□□□ 0.14
CHD9-208ENST00000563410 RRASP10301 218 aa15.95■□□□□ 0.14
CHD9-208ENST00000563410 CBX3Q13185 183 aa15.95■□□□□ 0.14
CHD9-208ENST00000563410 TEX45Q8NA69 505 aa15.95■□□□□ 0.14
CHD9-208ENST00000563410 USMG5Q96IX5 58 aa15.95■□□□□ 0.14
CHD9-208ENST00000563410 IFITM5A6NNB3 132 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 H0Y980 276 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 PDCD5O14737 125 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 RAB6AP20340 208 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 GADD45AP24522 165 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 UBE2KP61086 200 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 PRSS8Q16651 343 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 IDO2Q6ZQW0 420 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 Q6ZS49 121 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 H1FOOQ8IZA3 346 aaPredicted RBP15.94■□□□□ 0.14
CHD9-208ENST00000563410 PHB2Q99623 299 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 GINS4Q9BRT9 223 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 PALMDQ9NP74 551 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 SIGLEC8Q9NYZ4 499 aa15.94■□□□□ 0.14
CHD9-208ENST00000563410 ELF5Q9UKW6 265 aaPredicted RBP15.94■□□□□ 0.14
CHD9-208ENST00000563410 RBM7Q9Y580 266 aaKnown RBP15.94■□□□□ 0.14
CHD9-208ENST00000563410 A0A0B4J203 849 aa15.93■□□□□ 0.14
CHD9-208ENST00000563410 CRYZL1O95825 349 aa15.93■□□□□ 0.14
CHD9-208ENST00000563410 TBCEQ15813 527 aaPredicted RBP15.93■□□□□ 0.14
CHD9-208ENST00000563410 TNXAQ16473 311 aa15.93■□□□□ 0.14
CHD9-208ENST00000563410 VMA21Q3ZAQ7 101 aa15.93■□□□□ 0.14
CHD9-208ENST00000563410 ZFAND6Q6FIF0 208 aa15.93■□□□□ 0.14
CHD9-208ENST00000563410 SRSF12Q8WXF0 261 aaKnown RBP15.93■□□□□ 0.14
CHD9-208ENST00000563410 ADTRPQ96IZ2 230 aa15.93■□□□□ 0.14
CHD9-208ENST00000563410 LCE6AA0A183 80 aa15.92■□□□□ 0.14
CHD9-208ENST00000563410 IZUMO1RA6ND01 250 aa15.92■□□□□ 0.14
CHD9-208ENST00000563410 OR9G9P0C7N8 305 aa15.92■□□□□ 0.14
CHD9-208ENST00000563410 MECP2P51608 486 aaKnown RBP15.92■□□□□ 0.14
CHD9-208ENST00000563410 HAGHQ16775 308 aa15.92■□□□□ 0.14
CHD9-208ENST00000563410 RPEL1Q2QD12 228 aa15.92■□□□□ 0.14
CHD9-208ENST00000563410 NR2C2APQ86WQ0 139 aa15.92■□□□□ 0.14
CHD9-208ENST00000563410 EPPK1P58107 5090 aaKnown RBP15.91■□□□□ 0.14
CHD9-208ENST00000563410 RAB3BP20337 219 aa15.91■□□□□ 0.14
CHD9-208ENST00000563410 ZNF45Q02386 682 aa15.91■□□□□ 0.14
CHD9-208ENST00000563410 ARFRP1Q13795 201 aa15.91■□□□□ 0.14
CHD9-208ENST00000563410 ZNF367Q7RTV3 350 aa15.91■□□□□ 0.14
CHD9-208ENST00000563410 OSR1Q8TAX0 266 aaPredicted RBP15.91■□□□□ 0.14
CHD9-208ENST00000563410 ISOC1Q96CN7 298 aa15.91■□□□□ 0.14
CHD9-208ENST00000563410 SPATA25Q9BR10 227 aa15.91■□□□□ 0.14
CHD9-208ENST00000563410 ZNF430Q9H8G1 570 aaPredicted RBP15.91■□□□□ 0.14
CHD9-208ENST00000563410 AKIP1Q9NQ31 210 aa15.91■□□□□ 0.14
CHD9-208ENST00000563410 NDUFB11Q9NX14 153 aa15.91■□□□□ 0.14
CHD9-208ENST00000563410 TRBV9A0A0B4J1U6 114 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 BMPR1BO00238 502 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 OR2A4O95047 310 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 PRH1P02810 166 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 SAA1P0DJI8 122 aaPredicted RBP15.9■□□□□ 0.14
CHD9-208ENST00000563410 TALDO1P37837 337 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 TATDN3Q17R31 274 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 LCN12Q6JVE5 192 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 Q8N402 240 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 ACOT12Q8WYK0 555 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 SNAPC3Q92966 411 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 CENPOQ9BU64 300 aa15.9■□□□□ 0.14
CHD9-208ENST00000563410 TRDV1A0A1B0GX56 115 aa15.89■□□□□ 0.13
CHD9-208ENST00000563410 METTL21EPA6NDL7 271 aa15.89■□□□□ 0.13
CHD9-208ENST00000563410 MYL9P24844 172 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms