RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 BHLHA15Q7RTS1 189 aaPredicted RBP15.77■□□□□ 0.12
RAB40C-206ENST00000561781 ATP6V0BQ99437 205 aa15.77■□□□□ 0.12
RAB40C-206ENST00000561781 PLSCR4Q9NRQ2 329 aa15.77■□□□□ 0.12
RAB40C-206ENST00000561781 MT-CO2P00403 227 aa15.77■□□□□ 0.11
RAB40C-206ENST00000561781 S100GP29377 79 aa15.77■□□□□ 0.11
RAB40C-206ENST00000561781 SRD5A2P31213 254 aa15.77■□□□□ 0.11
RAB40C-206ENST00000561781 GNB1P62873 340 aa15.77■□□□□ 0.11
RAB40C-206ENST00000561781 ARL16Q0P5N6 197 aa15.77■□□□□ 0.11
RAB40C-206ENST00000561781 CNN3Q15417 329 aaKnown RBP15.77■□□□□ 0.11
RAB40C-206ENST00000561781 SAP25Q8TEE9 199 aa15.77■□□□□ 0.11
RAB40C-206ENST00000561781 CLEC7AQ9BXN2 247 aa15.77■□□□□ 0.11
RAB40C-206ENST00000561781 SPTBN4Q9H254 2564 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 GAGE10A6NGK3 116 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 GFRA3O60609 400 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 GOSR1O95249 250 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 OR8B8Q15620 311 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 ZNF324BQ6AW86 544 aaPredicted RBP15.76■□□□□ 0.11
RAB40C-206ENST00000561781 GTF2H5Q6ZYL4 71 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 C5orf17Q8NAS9 161 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 OR10V1Q8NGI7 309 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 OR5D13Q8NGL4 314 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 OR4C12Q96R67 309 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 ABI3Q9P2A4 366 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 A0A1W2PQD3 144 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 GPR6P46095 362 aaPredicted RBP15.76■□□□□ 0.11
RAB40C-206ENST00000561781 OR1D5P58170 312 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 OR10G9Q8NGN4 311 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 OR10G7Q8NGN6 311 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 ZNF501Q96CX3 271 aaPredicted RBP15.76■□□□□ 0.11
RAB40C-206ENST00000561781 MMABQ96EY8 250 aaPredicted RBP15.76■□□□□ 0.11
RAB40C-206ENST00000561781 TMEM38BQ9NVV0 291 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 PSENENQ9NZ42 101 aa15.76■□□□□ 0.11
RAB40C-206ENST00000561781 BLACEA4D250 179 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 NPIPB13A6NJU9 1138 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 NPIPB4C9JG80 1138 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 SPRY1O43609 319 aaPredicted RBP15.75■□□□□ 0.11
RAB40C-206ENST00000561781 LGALS4P56470 323 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 OR10W1Q8NGF6 305 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 PIGLQ9Y2B2 252 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 TRAV8-6A0A0B4J262 113 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 MUC21A0A0G2JKD1 596 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 MUC21A0A140T8X8 626 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 TRAPPC2LH3BP13 241 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 NDUFB4O95168 129 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 PLA2G5P39877 138 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 RPS18P62269 152 aaKnown RBP15.75■□□□□ 0.11
RAB40C-206ENST00000561781 RELBQ01201 579 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 MUC21Q5SSG8 566 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 PP6455Q8WZ26 134 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 RCHY1Q96PM5 261 aa15.75■□□□□ 0.11
RAB40C-206ENST00000561781 DHRS3O75911 302 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 CER1O95813 267 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 COX19Q49B96 90 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 ACSM6Q6P461 480 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 Q6ZPA2 131 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 OOSP2Q86WS3 158 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 ZNF114Q8NC26 417 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 SLC25A40Q8TBP6 338 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 NINJ1Q92982 152 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 STRADBQ9C0K7 418 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 KCNIP2Q9NS61 270 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 UBE2L5PA0A1B0GUS4 154 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 MC5RP33032 325 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 CLRN1P58418 232 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 PLCXD2Q0VAA5 305 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 LCN12Q6JVE5 192 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 ST20Q9HBF5 79 aa15.74■□□□□ 0.11
RAB40C-206ENST00000561781 LAMA5O15230 3695 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 SYNGR2O43760 224 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 NAPSAO96009 420 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 FUT6P51993 359 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 RNFT1Q5M7Z0 435 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 TSKUQ8WUA8 353 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 QTRT1Q9BXR0 403 aaKnown RBP15.73■□□□□ 0.11
RAB40C-206ENST00000561781 IGLV3-1P01715 115 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 THBS3P49746 956 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 RSPO4Q2I0M5 234 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-206ENST00000561781 UFSP1Q6NVU6 142 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 SLC37A2Q8TED4 501 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 NEUROG1Q92886 237 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 NAT8BQ9UHF3 227 aa15.73■□□□□ 0.11
RAB40C-206ENST00000561781 RTTNQ86VV8 2226 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 LMO7DNF2Z398 122 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 H0Y980 276 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 RAB29O14966 203 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 SMIM17P0DL12 118 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 COX5AP20674 150 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 GDF1P27539 372 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 GUCA1AP43080 201 aaPredicted RBP15.72■□□□□ 0.11
RAB40C-206ENST00000561781 HTD2P86397 168 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 PIGYQ3MUY2 71 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 CARD17Q5XLA6 110 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 ZNF818PQ6ZRF7 136 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 NEGR1Q7Z3B1 354 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 SCCPDHQ8NBX0 429 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 APOBEC3DQ96AK3 386 aaPredicted RBP15.72■□□□□ 0.11
RAB40C-206ENST00000561781 SLC7A10Q9NS82 523 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 RP1P56715 2156 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 PGPEP1LA6NFU8 196 aa15.72■□□□□ 0.11
RAB40C-206ENST00000561781 SLC22A20A6NK97 555 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms