RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 FAM25CB3EWG5 89 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 FAM25GB3EWG6 89 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 FCGR3BO75015 233 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 DUS4LO95620 317 aaKnown RBP10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 EIF4EP06730 217 aaKnown RBP10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 IGKV1-13P0DP09 117 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 PPIFP30405 207 aaKnown RBP10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 FXYD4P59646 89 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 FXYD3Q14802 87 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 VMA21Q3ZAQ7 101 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 ACTBL2Q562R1 376 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 MZT2AQ6P582 158 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 ETV3LQ6ZN32 361 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 ANKRD13BQ86YJ7 626 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 LINC00482Q8N8I6 264 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 LFNGQ8NES3 379 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 WFDC9Q8NEX5 89 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 OR5AP2Q8NGF4 316 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 CASTOR1Q8WTX7 329 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 ACOT12Q8WYK0 555 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 ARPC1AQ92747 370 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 RAX2Q96IS3 184 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 KLK15Q9H2R5 256 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 ZNF355PQ9NSJ1 428 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 TAS2R8Q9NYW2 309 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 FOXA2Q9Y261 457 aaPredicted RBP10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 RBMX2Q9Y388 322 aaKnown RBP10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 CMYA5Q8N3K9 4069 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 AADACP22760 399 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 PRSS3P35030 304 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 RAB9AP51151 201 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 PJVKQ0ZLH3 352 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 CDK10Q15131 360 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 TMEM177Q53S58 311 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 TCTEX1D1Q8N7M0 179 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 RNF152Q8N8N0 203 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 MINDY2Q8NBR6 621 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 C4orf3Q8WVX3 66 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 AP3S1Q92572 193 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 DPF1Q92782 380 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 UBE2E2Q96LR5 201 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 MS4A10Q96PG2 267 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 PHB2Q99623 299 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 EHFQ9NZC4 300 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 VSIG4Q9Y279 399 aa10.13□□□□□ -0.79
CTDSPL2-209ENST00000560620 TNFSF12O43508 249 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 HPGDSO60760 199 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 ACTL6BO94805 426 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 GABARAPO95166 117 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 PPYP01298 95 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 IGLV1-40P01703 118 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 IGLV2-23P01705 113 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 APOA1P02647 267 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 HERV-K104P61576 105 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 TNXAQ16473 311 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 CTF1Q16619 201 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 AKIRIN2Q53H80 203 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 FOXB2Q5VYV0 432 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 PYHIN1Q6K0P9 492 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 IDO2Q6ZQW0 420 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 TMEM17Q86X19 198 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 SNX29P2Q8IUI4 249 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 OR5H2Q8NGV7 314 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 OSR1Q8TAX0 266 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 DDB2Q92466 427 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 SNAPC3Q92966 411 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 HSD17B10Q99714 261 aaKnown RBP10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 MCRIP2Q9BUT9 160 aaKnown RBP10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 SLC5A7Q9GZV3 580 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 CCL28Q9NRJ3 127 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 NUBP2Q9Y5Y2 271 aa10.12□□□□□ -0.79
CTDSPL2-209ENST00000560620 SRRM4A7MD48 611 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 MPPED1O15442 326 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 SOX15O60248 233 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 PMP2P02689 132 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 EGR2P11161 476 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 RFX2P48378 723 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 CRIP2P52943 208 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 TPPP2P59282 170 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 UBE2KP61086 200 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 RPL30P62888 115 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 KPRPQ5T749 579 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 MFSD4AQ8N468 514 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 ZNF491Q8N8L2 437 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 OR11H1Q8NG94 326 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 OR5M8Q8NGP6 311 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 OR4S2Q8NH73 311 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 GPHA2Q96T91 129 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 P2RX4Q99571 388 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 GPR61Q9BZJ8 451 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 GNB4Q9HAV0 340 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 NOTCH3Q9UM47 2321 aa10.11□□□□□ -0.79
CTDSPL2-209ENST00000560620 ARPC1BO15143 372 aaKnown RBP10.1□□□□□ -0.79
CTDSPL2-209ENST00000560620 RGS5O15539 181 aa10.1□□□□□ -0.79
CTDSPL2-209ENST00000560620 CREBL2O60519 120 aaPredicted RBP10.1□□□□□ -0.79
CTDSPL2-209ENST00000560620 NOL3O60936 208 aaKnown RBP10.1□□□□□ -0.79
CTDSPL2-209ENST00000560620 IGLV2-14P01704 120 aa10.1□□□□□ -0.79
CTDSPL2-209ENST00000560620 TRGV3P03979 118 aa10.1□□□□□ -0.79
CTDSPL2-209ENST00000560620 SAA1P0DJI8 122 aaPredicted RBP10.1□□□□□ -0.79
CTDSPL2-209ENST00000560620 APELAP0DMC3 54 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms