RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 DCTN2Q13561 401 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 MSMO1Q15800 293 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 CTF1Q16619 201 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 RTL8BQ17RB0 113 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 AKIRIN2Q53H80 203 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 OVCH2Q7RTZ1 564 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 PPP1R27Q86WC6 154 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 BVESQ8NE79 360 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 SNAPC3Q92966 411 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 RAX2Q96IS3 184 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 UBE2E2Q96LR5 201 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 HARBI1Q96MB7 349 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 TPSG1Q9NRR2 321 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 ZMAT5Q9UDW3 170 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 ANAPC10Q9UM13 185 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 RBMX2Q9Y388 322 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 CCL24O00175 119 aa11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 SOX15O60248 233 aa11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 CA2P00918 260 aa11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 ALDH3B2P48448 385 aa11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 RAB9AP51151 201 aa11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 RUNX1Q01196 453 aa11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 TMEM267Q0VDI3 215 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 EIF4EBP1Q13541 118 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 ZNF491Q8N8L2 437 aa11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 OSR1Q8TAX0 266 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 C4orf3Q8WVX3 66 aa11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 ACOT12Q8WYK0 555 aa11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 MRPS26Q9BYN8 205 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 FOXA2Q9Y261 457 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-210ENST00000560383 WI2-2373I1.2A0A1W2PRP0 233 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 ARPC1BO15143 372 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 SHOXO15266 292 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 APOA1P02647 267 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 NAT1P18440 290 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 TAS2R20P59543 309 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 ARPC4P59998 168 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 UBE2KP61086 200 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 RPL30P62888 115 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 CBX3Q13185 183 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 FHL3Q13643 280 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 ECSCRQ19T08 205 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 MRGPRG-AS1Q2M3A8 158 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 TMEM69Q5SWH9 247 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 TMEM65Q6PI78 240 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 TEX45Q8NA69 505 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 OR5AP2Q8NGF4 316 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 OR5M8Q8NGP6 311 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 CLCC1Q96S66 551 aa11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 NAA50Q9GZZ1 169 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 KMT2CQ8NEZ4 4911 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-210ENST00000560383 I3L521 148 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 J3QRK9 145 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 CRYZL1O95825 349 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 EIF4EP06730 217 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 HOXD3P31249 432 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 FCGR2CP31995 323 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 RORCP51449 518 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 PJVKQ0ZLH3 352 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 FXYD3Q14802 87 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 VAX1Q5SQQ9 334 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 PYHIN1Q6K0P9 492 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 GIMAP1Q8WWP7 306 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 ARPC1AQ92747 370 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 HSD17B10Q99714 261 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 FAM103A1Q9BTL3 118 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 COMMD3Q9UBI1 195 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 VSIG4Q9Y279 399 aa11.79□□□□□ -0.52
SNRPA1-210ENST00000560383 A0A1W2PN81 502 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 PPYP01298 95 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 AADACP22760 399 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 CHRNA7P36544 502 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 DEFB136Q30KP8 78 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 ACTBL2Q562R1 376 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 UNQ5815/PRO19632Q6UWF5 114 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 ZNF66Q6ZN08 573 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 KCTD9Q7L273 389 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 LFNGQ8NES3 379 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 DUX3Q96PT4 197 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 GNB4Q9HAV0 340 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 PRELID3BQ9Y3B1 194 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 A3GALT2U3KPV4 340 aa11.78□□□□□ -0.52
SNRPA1-210ENST00000560383 FCGR3BO75015 233 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 BRI3O95415 125 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 PRSS3P35030 304 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 CDK10Q15131 360 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 VMA21Q3ZAQ7 101 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 GPR107Q5VW38 600 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 DHRS11Q6UWP2 260 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 MFSD4AQ8N468 514 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 ZBTB34Q8NCN2 500 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 GPX8Q8TED1 209 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 ABHD5Q8WTS1 349 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 TMEM68Q96MH6 324 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 B9D2Q9BPU9 175 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 IFT46Q9NQC8 304 aa11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 MRPS7Q9Y2R9 242 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-210ENST00000560383 MEIS3P1A6NDR6 274 aa11.76□□□□□ -0.53
SNRPA1-210ENST00000560383 H3BUA1 57 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms