RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 RNASE12Q5GAN4 147 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 FOXRED2Q8IWF2 684 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 FAM71E2Q8N5Q1 922 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 C5orf56Q8N8D9 126 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 CCDC71LQ8N9Z2 235 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 LINC01006Q8NI28 216 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 RSRP1Q9BUV0 290 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 WDR12Q9GZL7 423 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 SRRQ9GZT4 340 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 CCL28Q9NRJ3 127 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 RNF114Q9Y508 228 aa9.61□□□□□ -0.87
RABGGTA-215ENST00000560207 M0QYG6 137 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 RRHO14718 337 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 SHOXO15266 292 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 ATG12O94817 140 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 IGHG2P01859 326 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 HLA-DRB1P01911 266 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 FGF2P09038 288 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 RND3P61587 244 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 EIF4EBP1Q13541 118 aaPredicted RBP9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 C5orf64Q2M2E5 130 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 LIN54Q6MZP7 749 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 ZNF818PQ6ZRF7 136 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 CADM3Q8N126 398 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 DRAXINQ8NBI3 349 aaPredicted RBP9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 TCTEX1D2Q8WW35 142 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 TRIM63Q969Q1 353 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 SLC25A21Q9BQT8 299 aaPredicted RBP9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 TINAGL1Q9GZM7 467 aaPredicted RBP9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 PLSCR3Q9NRY6 295 aa9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 C14orf166Q9Y224 244 aaKnown RBP9.6□□□□□ -0.87
RABGGTA-215ENST00000560207 CUBNO60494 3623 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 J3QRK9 145 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 AP4M1O00189 453 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 HPRT1P00492 218 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 RPA2P15927 270 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 F2RP25116 425 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 VDAC2P45880 294 aaPredicted RBP9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 PPP5CP53041 499 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 UBE2KP61086 200 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 RELBQ01201 579 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 ZNF846Q147U1 533 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 PLGLAQ15195 96 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 SCGB2B2Q4G0G5 96 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 AWAT1Q58HT5 328 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 AADACL3Q5VUY0 350 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 ZNF57Q68EA5 555 aaPredicted RBP9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 GLDNQ6ZMI3 551 aaPredicted RBP9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 COMMD1Q8N668 190 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 C3orf56Q8N813 242 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 Q8N9W7 124 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 TEX45Q8NA69 505 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 OR4C16Q8NGL9 310 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 CHPT1Q8WUD6 406 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 HARBI1Q96MB7 349 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 FXYD6Q9H0Q3 95 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 ZNF702PQ9H963 129 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 PLEKHA2Q9HB19 425 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 COPZ2Q9P299 210 aa9.59□□□□□ -0.87
RABGGTA-215ENST00000560207 LINC00473A8K010 186 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 FCGR3BO75015 233 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 PGLYRP1O75594 196 aaPredicted RBP9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 CRYZL1O95825 349 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 IGKV1-16P04430 117 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 AMY1AP04745 511 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 CTSDP07339 412 aaPredicted RBP9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 ZNF735P0CB33 412 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 PGAM2P15259 253 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 TAS2R31P59538 309 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 BLCAPP62952 87 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 SLC35B1P78383 322 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 TMEM267Q0VDI3 215 aaPredicted RBP9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 KLF9Q13886 244 aaPredicted RBP9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 SHISA2Q6UWI4 295 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 ZNF562Q6V9R5 426 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 IDO2Q6ZQW0 420 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 SLC35E3Q7Z769 313 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 PPP1R27Q86WC6 154 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 SPAG16Q8N0X2 631 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 OR4A5Q8NH83 315 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 TMEM68Q96MH6 324 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 ZNF747Q9BV97 191 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 AKIP1Q9NQ31 210 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 SLC2A9Q9NRM0 540 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 MCUBQ9NWR8 336 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 COMMD9Q9P000 198 aa9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 METTL1Q9UBP6 276 aaKnown RBP9.58□□□□□ -0.88
RABGGTA-215ENST00000560207 IGF1P05019 195 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 NQO2P16083 231 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 MAS1LP35410 378 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 F2RL1P55085 397 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 PROK1P58294 105 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 SRSF2Q01130 221 aaKnown RBP9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 PSG5Q15238 335 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 POU2AF1Q16633 256 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 C9orf152Q5JTZ5 239 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 MMD2Q8IY49 270 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 OR51S1Q8NGJ8 323 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 C5orf30Q96GV9 206 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 HRASLSQ9HDD0 168 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms