RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 DUTP33316 252 aaKnown RBP13.63□□□□□ -0.23
HDDC3-205ENST00000559898 SDC2P34741 201 aa13.63□□□□□ -0.23
HDDC3-205ENST00000559898 RPL30P62888 115 aaKnown RBP13.63□□□□□ -0.23
HDDC3-205ENST00000559898 TAGLNQ01995 201 aaKnown RBP13.63□□□□□ -0.23
HDDC3-205ENST00000559898 MXD1Q05195 221 aa13.63□□□□□ -0.23
HDDC3-205ENST00000559898 TMEM267Q0VDI3 215 aaPredicted RBP13.63□□□□□ -0.23
HDDC3-205ENST00000559898 TMEM177Q53S58 311 aa13.63□□□□□ -0.23
HDDC3-205ENST00000559898 GPHA2Q96T91 129 aa13.63□□□□□ -0.23
HDDC3-205ENST00000559898 GINS4Q9BRT9 223 aa13.63□□□□□ -0.23
HDDC3-205ENST00000559898 ZNF355PQ9NSJ1 428 aa13.63□□□□□ -0.23
HDDC3-205ENST00000559898 SORL1Q92673 2214 aa13.62□□□□□ -0.23
HDDC3-205ENST00000559898 ANKRD34BA5PLL1 514 aa13.62□□□□□ -0.23
HDDC3-205ENST00000559898 METTL21EPA6NDL7 271 aa13.62□□□□□ -0.23
HDDC3-205ENST00000559898 MRPS14O60783 128 aaKnown RBP13.62□□□□□ -0.23
HDDC3-205ENST00000559898 TRBV12-3P01733 135 aa13.62□□□□□ -0.23
HDDC3-205ENST00000559898 TALDO1P37837 337 aa13.62□□□□□ -0.23
HDDC3-205ENST00000559898 ACSM6Q6P461 480 aa13.62□□□□□ -0.23
HDDC3-205ENST00000559898 SFXN4Q6P4A7 337 aa13.62□□□□□ -0.23
HDDC3-205ENST00000559898 Q6ZS49 121 aa13.62□□□□□ -0.23
HDDC3-205ENST00000559898 TCTEX1D1Q8N7M0 179 aa13.62□□□□□ -0.23
HDDC3-205ENST00000559898 SLC25A38Q96DW6 304 aa13.62□□□□□ -0.23
HDDC3-205ENST00000559898 RBM7Q9Y580 266 aaKnown RBP13.62□□□□□ -0.23
HDDC3-205ENST00000559898 SHOXO15266 292 aa13.61□□□□□ -0.23
HDDC3-205ENST00000559898 CNIH1O95406 144 aa13.61□□□□□ -0.23
HDDC3-205ENST00000559898 CRYZL1O95825 349 aa13.61□□□□□ -0.23
HDDC3-205ENST00000559898 HSPB1P04792 205 aaKnown RBP13.61□□□□□ -0.23
HDDC3-205ENST00000559898 FCER2P06734 321 aa13.61□□□□□ -0.23
HDDC3-205ENST00000559898 OR2B11Q5JQS5 317 aa13.61□□□□□ -0.23
HDDC3-205ENST00000559898 HACD4Q5VWC8 232 aa13.61□□□□□ -0.23
HDDC3-205ENST00000559898 ZNF773Q6PK81 442 aa13.61□□□□□ -0.23
HDDC3-205ENST00000559898 POC5Q8NA72 575 aa13.61□□□□□ -0.23
HDDC3-205ENST00000559898 CENPOQ9BU64 300 aa13.61□□□□□ -0.23
HDDC3-205ENST00000559898 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDDC3-205ENST00000559898 TRIM64CA6NLI5 447 aa13.6□□□□□ -0.23
HDDC3-205ENST00000559898 PRH1P02810 166 aa13.6□□□□□ -0.23
HDDC3-205ENST00000559898 DTYMKP23919 212 aa13.6□□□□□ -0.23
HDDC3-205ENST00000559898 BRWD1-AS2P59051 145 aa13.6□□□□□ -0.23
HDDC3-205ENST00000559898 NEDD8Q15843 81 aa13.6□□□□□ -0.23
HDDC3-205ENST00000559898 SRSF7Q16629 238 aaKnown RBP eCLIP13.6□□□□□ -0.23
HDDC3-205ENST00000559898 C10orf55Q5SWW7 151 aa13.6□□□□□ -0.23
HDDC3-205ENST00000559898 C19orf35Q6ZS72 473 aa13.6□□□□□ -0.23
HDDC3-205ENST00000559898 OVCH2Q7RTZ1 564 aa13.6□□□□□ -0.23
HDDC3-205ENST00000559898 SSR3Q9UNL2 185 aa13.6□□□□□ -0.23
HDDC3-205ENST00000559898 NBEAL2Q6ZNJ1 2754 aa13.6□□□□□ -0.23
HDDC3-205ENST00000559898 RYR3Q15413 4870 aa13.59□□□□□ -0.23
HDDC3-205ENST00000559898 LOC100506127A0A0U1RQW1 187 aa13.59□□□□□ -0.23
HDDC3-205ENST00000559898 MSGN1A6NI15 193 aa13.59□□□□□ -0.23
HDDC3-205ENST00000559898 DIRAS3O95661 229 aa13.59□□□□□ -0.23
HDDC3-205ENST00000559898 LGALS7P47929 136 aa13.59□□□□□ -0.23
HDDC3-205ENST00000559898 DYRK1AQ13627 763 aa13.59□□□□□ -0.23
HDDC3-205ENST00000559898 PYHIN1Q6K0P9 492 aa13.59□□□□□ -0.23
HDDC3-205ENST00000559898 ZNF429Q86V71 674 aa13.59□□□□□ -0.23
HDDC3-205ENST00000559898 VKORC1L1Q8N0U8 176 aa13.59□□□□□ -0.23
HDDC3-205ENST00000559898 GVQW1Q8N7I0 195 aa13.59□□□□□ -0.23
HDDC3-205ENST00000559898 DNAH7Q8WXX0 4024 aa13.58□□□□□ -0.24
HDDC3-205ENST00000559898 FCGR3BO75015 233 aa13.58□□□□□ -0.24
HDDC3-205ENST00000559898 SAA1P0DJI8 122 aaPredicted RBP13.58□□□□□ -0.24
HDDC3-205ENST00000559898 EIF4EBP1Q13541 118 aaPredicted RBP13.58□□□□□ -0.24
HDDC3-205ENST00000559898 TNXAQ16473 311 aa13.58□□□□□ -0.24
HDDC3-205ENST00000559898 PRSS8Q16651 343 aa13.58□□□□□ -0.24
HDDC3-205ENST00000559898 TPRA1Q86W33 373 aa13.58□□□□□ -0.24
HDDC3-205ENST00000559898 SBSPONQ8IVN8 264 aa13.58□□□□□ -0.24
HDDC3-205ENST00000559898 FCGR1BQ92637 280 aa13.58□□□□□ -0.24
HDDC3-205ENST00000559898 SLA2Q9H6Q3 261 aa13.58□□□□□ -0.24
HDDC3-205ENST00000559898 ZNF430Q9H8G1 570 aaPredicted RBP13.58□□□□□ -0.24
HDDC3-205ENST00000559898 RHBDL2Q9NX52 303 aa13.58□□□□□ -0.24
HDDC3-205ENST00000559898 ZMAT5Q9UDW3 170 aaKnown RBP13.58□□□□□ -0.24
HDDC3-205ENST00000559898 TUSC2O75896 110 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 HLA-DQB1P01920 261 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 GP9P14770 177 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 INSL3P51460 131 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 UBE2KP61086 200 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 ZNF45Q02386 682 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 RTL8BQ17RB0 113 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 IDNKQ5T6J7 187 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 IL34Q6ZMJ4 242 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 ZNF645Q8N7E2 425 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 WWC2-AS2Q96NR7 200 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 YTHDF1Q9BYJ9 559 aaKnown RBP13.57□□□□□ -0.24
HDDC3-205ENST00000559898 TINAGL1Q9GZM7 467 aaPredicted RBP13.57□□□□□ -0.24
HDDC3-205ENST00000559898 COA4Q9NYJ1 87 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 RBMX2Q9Y388 322 aaKnown RBP13.57□□□□□ -0.24
HDDC3-205ENST00000559898 OR2W1Q9Y3N9 320 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 U3KQK5 164 aa13.57□□□□□ -0.24
HDDC3-205ENST00000559898 TRAV18A0A075B6X5 111 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 A0A1B0GW64 132 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 E7EUB6 86 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 MYOD1P15172 320 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 CD36P16671 472 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 RANBP1P43487 201 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 GNG2P59768 71 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 PITPNAQ00169 270 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 TEX45Q8NA69 505 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 ADAD2Q8NCV1 583 aaKnown RBP13.56□□□□□ -0.24
HDDC3-205ENST00000559898 SRSF12Q8WXF0 261 aaKnown RBP13.56□□□□□ -0.24
HDDC3-205ENST00000559898 ANXA10Q9UJ72 324 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 TENM3Q9P273 2699 aa13.56□□□□□ -0.24
HDDC3-205ENST00000559898 C13orf42A0A1B0GVH6 325 aa13.55□□□□□ -0.24
HDDC3-205ENST00000559898 MEIS3P1A6NDR6 274 aa13.55□□□□□ -0.24
HDDC3-205ENST00000559898 VMA21Q3ZAQ7 101 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms