RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 M0R1X1 148 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 SLC31A2O15432 143 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 SPRY3O43610 288 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 CYB5R3P00387 301 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-216ENST00000559819 FABP1P07148 127 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HOXA5P20719 270 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 ZNF134P52741 427 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 B2MP61769 119 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 C4orf17Q53FE4 359 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 PDZD11Q5EBL8 140 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 GCSAMLQ5JQS6 135 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 C1orf229Q6ZS94 237 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-216ENST00000559819 CENPVQ7Z7K6 275 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-216ENST00000559819 MOGAT3Q86VF5 341 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 S100PBPQ96BU1 408 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 FAM210BQ96KR6 192 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HSD17B10Q99714 261 aaKnown RBP8.34□□□□□ -1.07
LRRC28-216ENST00000559819 SMIM7Q9BQ49 75 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 ZNF251Q9BRH9 671 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 GSN-AS1Q9NRJ2 163 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 NBEAQ8NFP9 2946 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 CTXND1A0A1B0GTU2 59 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 ZNF891A8MT65 544 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-216ENST00000559819 SRRM5B3KS81 715 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 EDDM3BP56851 147 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 MEF2BQ02080 365 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-216ENST00000559819 ATP6V1FQ16864 119 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 MORN2Q502X0 79 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 DUX4L9Q6RFH8 374 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-216ENST00000559819 NECAP1Q8NC96 275 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 OR2V2Q96R30 315 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 MRPL37Q9BZE1 423 aaKnown RBP8.33□□□□□ -1.08
LRRC28-216ENST00000559819 WASF3Q9UPY6 502 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 B4DEV8 164 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 CLDN34H7C241 214 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 S100A12P80511 92 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 HTD2P86397 168 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 PNRC1Q12796 327 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-216ENST00000559819 ZNF474Q6S9Z5 364 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-216ENST00000559819 C16orf82Q7Z2V1 217 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 C1orf87Q8N0U7 546 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 OR4F5Q8NH21 305 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 FRZBQ92765 325 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 RAB24Q969Q5 203 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 OR4F4Q96R69 305 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 OR6C3Q9NZP0 311 aa8.33□□□□□ -1.08
LRRC28-216ENST00000559819 SMCO3A2RU48 225 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 AHRRA9YTQ3 701 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 ADH4P08319 380 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 RND2P52198 227 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 CLEC12BQ2HXU8 276 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 PRAMEF5Q5TYX0 476 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 ABHD5Q8WTS1 349 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 MEGF10Q96KG7 1140 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 TCEAL7Q9BRU2 100 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 ACTR3CQ9C0K3 210 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-216ENST00000559819 ZMAT5Q9UDW3 170 aaKnown RBP8.32□□□□□ -1.08
LRRC28-216ENST00000559819 MIOXQ9UGB7 285 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 PTPRBP23467 1997 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 A0A1B0GWJ7 208 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 PAGE4O60829 102 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 TRGC1P0CF51 173 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 PSMB3P49720 205 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 RTP5Q14D33 572 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 P2RY6Q15077 328 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 FAM90A1Q86YD7 464 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 Q8N7P7 452 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 ZNF709Q8N972 641 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 ITLN1Q8WWA0 313 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 CIB3Q96Q77 187 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-216ENST00000559819 PARLQ9H300 379 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 NAT8Q9UHE5 227 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 HEATR1Q9H583 2144 aaKnown RBP8.32□□□□□ -1.08
LRRC28-216ENST00000559819 TTC28Q96AY4 2481 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 CACNA1GO43497 2377 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 OTOGLQ3ZCN5 2332 aa8.32□□□□□ -1.08
LRRC28-216ENST00000559819 TRAV38-1A0A0B4J264 116 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 SOD3P08294 240 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 COL8A2P25067 703 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 CDX1P47902 265 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-216ENST00000559819 RPL23P62829 140 aaKnown RBP8.31□□□□□ -1.08
LRRC28-216ENST00000559819 VWC2Q2TAL6 325 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 TCTEX1D1Q8N7M0 179 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 SNX22Q96L94 193 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 IFI27L2Q9H2X8 130 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 FAM215AQ9Y5M1 114 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 CADP27708 2225 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 MBD3L4A6NDZ8 208 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-216ENST00000559819 MBD3L3A6NE82 208 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-216ENST00000559819 MBD3L5A6NJ08 208 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-216ENST00000559819 RRHO14718 337 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 MGST3O14880 152 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 GALR2O43603 387 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-216ENST00000559819 KBTBD11O94819 623 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 CRYAAP02489 173 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 RD3LP0DJH9 198 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 TUBG1P23258 451 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 LOXL3P58215 753 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 GNB2P62879 340 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms