RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TUBA4BQ9H853 241 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 COA4Q9NYJ1 87 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 RAB26Q9ULW5 256 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 TRBV6-7A0A0A0MS04 114 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 SHISA3A0PJX4 238 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 SHOXO15266 292 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 FABP7O15540 132 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 MECP2P51608 486 aaKnown RBP9.93□□□□□ -0.82
TPM1-220ENST00000559556 AQP4P55087 323 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 CBX3Q13185 183 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 IRF3Q14653 427 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 TRAM1Q15629 374 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 TATDN3Q17R31 274 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 RTL8BQ17RB0 113 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 IGSF11Q5DX21 431 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 LINC00322Q6ZN03 302 aaPredicted RBP9.93□□□□□ -0.82
TPM1-220ENST00000559556 LAX1Q8IWV1 398 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 UFD1Q92890 307 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 SNAPC3Q92966 411 aa9.93□□□□□ -0.82
TPM1-220ENST00000559556 AK6Q9Y3D8 172 aaKnown RBP9.93□□□□□ -0.82
TPM1-220ENST00000559556 A0A0B4J203 849 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 SRRM4A7MD48 611 aaKnown RBP9.92□□□□□ -0.82
TPM1-220ENST00000559556 BMPR1BO00238 502 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 BET1O15155 118 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 AIREO43918 545 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 ARL6IP5O75915 188 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 FCGR3AP08637 254 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 CD3GP09693 182 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 OR9G9P0C7N8 305 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 APELAP0DMC3 54 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 RRASP10301 218 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 CLDN12P56749 244 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 TPBGQ13641 420 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 OR10J5Q8NHC4 309 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 DDB2Q92466 427 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 TMEM203Q969S6 136 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 FAM3DQ96BQ1 224 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 PHB2Q99623 299 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 HIPK2Q9H2X6 1198 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 PEMTQ9UBM1 199 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 KCNK7Q9Y2U2 307 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 CEPT1Q9Y6K0 416 aa9.92□□□□□ -0.82
TPM1-220ENST00000559556 TRBV9A0A0B4J1U6 114 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 TMEM272A0A1B0GTI8 110 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 FAM223BA6NKX1 122 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 PTGES3LE9PB15 166 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 DENRO43583 198 aaKnown RBP9.91□□□□□ -0.82
TPM1-220ENST00000559556 PSMA1P25786 263 aaKnown RBP9.91□□□□□ -0.82
TPM1-220ENST00000559556 RANBP1P43487 201 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 UBE2KP61086 200 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 RPS25P62851 125 aaKnown RBP9.91□□□□□ -0.82
TPM1-220ENST00000559556 PLA2G7Q13093 441 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 EXOSC2Q13868 293 aaKnown RBP9.91□□□□□ -0.82
TPM1-220ENST00000559556 PRSS8Q16651 343 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 FAM223AQ8IWN6 122 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 TEX45Q8NA69 505 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 SRSF12Q8WXF0 261 aaKnown RBP9.91□□□□□ -0.82
TPM1-220ENST00000559556 ADTRPQ96IZ2 230 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 PLEKHA3Q9HB20 300 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 RETNQ9HD89 108 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 AKIP1Q9NQ31 210 aa9.91□□□□□ -0.82
TPM1-220ENST00000559556 ZNF230Q9UIE0 474 aaPredicted RBP9.91□□□□□ -0.82
TPM1-220ENST00000559556 MSGN1A6NI15 193 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 LINC00473A8K010 186 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 JTBO76095 146 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 CRYZL1O95825 349 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 GSTT2P0CG29 244 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 GSTT2BP0CG30 244 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 CALRP27797 417 aaKnown RBP9.9□□□□□ -0.82
TPM1-220ENST00000559556 DUTP33316 252 aaKnown RBP9.9□□□□□ -0.82
TPM1-220ENST00000559556 CD81P60033 236 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 MRPS15P82914 257 aaKnown RBP9.9□□□□□ -0.82
TPM1-220ENST00000559556 RHOGP84095 191 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 ZNF45Q02386 682 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 TNXAQ16473 311 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 C2orf76Q3KRA6 126 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 VMA21Q3ZAQ7 101 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 IDO2Q6ZQW0 420 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 IL17DQ8TAD2 202 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 OSR1Q8TAX0 266 aaPredicted RBP9.9□□□□□ -0.82
TPM1-220ENST00000559556 RAB3CQ96E17 227 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 SCN3BQ9NY72 215 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 RAB22AQ9UL26 194 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 V9GY05 133 aa9.9□□□□□ -0.82
TPM1-220ENST00000559556 DNAH6Q9C0G6 4158 aa9.89□□□□□ -0.83
TPM1-220ENST00000559556 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.89□□□□□ -0.83
TPM1-220ENST00000559556 MFNGO00587 321 aa9.89□□□□□ -0.83
TPM1-220ENST00000559556 MPPED1O15442 326 aa9.89□□□□□ -0.83
TPM1-220ENST00000559556 TPPPO94811 219 aa9.89□□□□□ -0.83
TPM1-220ENST00000559556 MLLT11Q13015 90 aaPredicted RBP9.89□□□□□ -0.83
TPM1-220ENST00000559556 CD300EQ496F6 205 aaPredicted RBP9.89□□□□□ -0.83
TPM1-220ENST00000559556 Q6ZS49 121 aa9.89□□□□□ -0.83
TPM1-220ENST00000559556 ACOT12Q8WYK0 555 aa9.89□□□□□ -0.83
TPM1-220ENST00000559556 FAM110AQ9BQ89 295 aa9.89□□□□□ -0.83
TPM1-220ENST00000559556 NEURL2Q9BR09 285 aa9.89□□□□□ -0.83
TPM1-220ENST00000559556 ZNF430Q9H8G1 570 aaPredicted RBP9.89□□□□□ -0.83
TPM1-220ENST00000559556 ZC4H2Q9NQZ6 224 aa9.89□□□□□ -0.83
TPM1-220ENST00000559556 SLC2A8Q9NY64 477 aa9.89□□□□□ -0.83
TPM1-220ENST00000559556 RBMY1BA6NDE4 496 aaKnown RBP9.88□□□□□ -0.83
TPM1-220ENST00000559556 RBMY1EA6NEQ0 496 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms