RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 TNCP24821 2201 aa4.71□□□□□ -1.65
CTDSPL2-204ENST00000558966 IGHV7-81A0A0B4J1V7 117 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 AIREO43918 545 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 SCGNO76038 276 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 HLA-DRB1P01911 266 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 IGF1P05019 195 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 ELANEP08246 267 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 OR8U9P0C7N5 309 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 SMIM18P0DKX4 95 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 TALDO1P37837 337 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 LSM3P62310 102 aaKnown RBP4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 RPL23AP62750 156 aaKnown RBP4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 NDPQ00604 133 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 ARL6IP1Q15041 203 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 BEAN1Q3B7T3 259 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 KPRPQ5T749 579 aaPredicted RBP4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 OR8U1Q8NH10 309 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 OR10J5Q8NHC4 309 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 PHF21AQ96BD5 680 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 OR2D2Q9H210 308 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 FBXL15Q9H469 300 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 VCX3AQ9NNX9 186 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 ZNF221Q9UK13 617 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 WASHC3Q9Y3C0 194 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 ETV7Q9Y603 341 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 DBX1A6NMT0 343 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 H7C2Y5 167 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 M0R1X1 148 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 RRHO14718 337 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 ATP6V0E1O15342 81 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 IGKV1-16P04430 117 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 TFAP2AP05549 437 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 SLC35B1P78383 322 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 PNLIPRP3Q17RR3 467 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 CD300EQ496F6 205 aaPredicted RBP4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 PDLIM3Q53GG5 364 aaPredicted RBP4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 CCDC28AQ8IWP9 274 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 H1FOOQ8IZA3 346 aaPredicted RBP4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 COMMD1Q8N668 190 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 WFDC9Q8NEX5 89 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 FUNDC2Q9BWH2 189 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 OR51J1Q9H342 316 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 SDHAF2Q9NX18 166 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 KIAA1456Q9P272 454 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 ZNF580Q9UK33 172 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 SPATA2Q9UM82 520 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 FBXO7Q9Y3I1 522 aa4.71□□□□□ -1.66
CTDSPL2-204ENST00000558966 TRAV18A0A075B6X5 111 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 KRTAP9-6A0A140TA67 174 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 G3V318 75 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 RBBP9O75884 186 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 SCAF4O95104 1147 aaKnown RBP4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 IGHG4P01861 327 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 PTHLHP12272 177 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 VDAC1P21796 283 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 PPIFP30405 207 aaKnown RBP4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 MC5RP33032 325 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 GNG2P59768 71 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 NCS1P62166 190 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 PITPNAQ00169 270 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 FOXE3Q13461 319 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 ICAM4Q14773 271 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 PSG5Q15238 335 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 LIN54Q6MZP7 749 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 TEX38Q6PEX7 206 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 OR13F1Q8NGS4 319 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 RNF5Q99942 180 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 GINS4Q9BRT9 223 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 ST6GALNAC5Q9BVH7 336 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 GON7Q9BXV9 100 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 DCSTAMPQ9H295 470 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 PARP11Q9NR21 331 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 SLC35D1Q9NTN3 355 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 GAB2Q9UQC2 676 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 WSB1Q9Y6I7 421 aa4.7□□□□□ -1.66
CTDSPL2-204ENST00000558966 A0A0A6YYH2 397 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 IGKV1D-13A0A0B4J2D9 117 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 A6NJ64 397 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 LINC00473A8K010 186 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 J3QRK9 145 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 FCN1O00602 326 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 SPDEFO95238 335 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 APOA2P02652 100 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 PRB2P02812 416 aaPredicted RBP4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 IGKV1-13P0DP09 117 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 IGLL1P15814 213 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 NFYAP23511 347 aaPredicted RBP4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 PSMB8P28062 276 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 THBS3P49746 956 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 CRIP2P52943 208 aaPredicted RBP4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 VBP1P61758 197 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 CX3CL1P78423 397 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 SSBP2P81877 361 aaPredicted RBP4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 CXorf66Q5JRM2 361 aaPredicted RBP4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 CNIH2Q6PI25 160 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 PDPNQ86YL7 162 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 ZNF695Q8IW36 515 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 GVQW1Q8N7I0 195 aa4.69□□□□□ -1.66
CTDSPL2-204ENST00000558966 KLHL30-AS1Q8NEE0 82 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms