RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 COMMD3Q9UBI1 195 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 SPATA2Q9UM82 520 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 ETV7Q9Y603 341 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 IGKV1D-13A0A0B4J2D9 117 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 LINC00473A8K010 186 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 FCGR3BO75015 233 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 SCGNO76038 276 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 CRYZL1O95825 349 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 IGF1P05019 195 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 ELANEP08246 267 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 OR5H8P0DN80 308 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 IGKV1-13P0DP09 117 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 LUMP51884 338 aaPredicted RBP9.37□□□□□ -0.91
TPM1-216ENST00000558910 FXYD4P59646 89 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 CFHR3Q02985 330 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 RNASE12Q5GAN4 147 aaKnown RBP9.37□□□□□ -0.91
TPM1-216ENST00000558910 PDPNQ86YL7 162 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 BEST4Q8NFU0 473 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 SECTM1Q8WVN6 248 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 IFT46Q9NQC8 304 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 AURKAIP1Q9NWT8 199 aaPredicted RBP9.37□□□□□ -0.91
TPM1-216ENST00000558910 ANXA10Q9UJ72 324 aa9.37□□□□□ -0.91
TPM1-216ENST00000558910 MRPS7Q9Y2R9 242 aaKnown RBP9.37□□□□□ -0.91
TPM1-216ENST00000558910 SRRM4A7MD48 611 aaKnown RBP9.36□□□□□ -0.91
TPM1-216ENST00000558910 RBBP9O75884 186 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 IGHG4P01861 327 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 AADACP22760 399 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 FCGR2CP31995 323 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 MYCNOSP40205 109 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 PITPNAQ00169 270 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 FXYD3Q14802 87 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 RTL8BQ17RB0 113 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 CNIH2Q6PI25 160 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 OR11H1Q8NG94 326 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 TCTEX1D2Q8WW35 142 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 ARPC1AQ92747 370 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 S100A16Q96FQ6 103 aaKnown RBP9.36□□□□□ -0.91
TPM1-216ENST00000558910 PHB2Q99623 299 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 DCSTAMPQ9H295 470 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 GHITMQ9H3K2 345 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 AUNIPQ9H7T9 357 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 TAS2R8Q9NYW2 309 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 OR2W1Q9Y3N9 320 aa9.36□□□□□ -0.91
TPM1-216ENST00000558910 ARPC1BO15143 372 aaKnown RBP9.35□□□□□ -0.91
TPM1-216ENST00000558910 PAX4O43316 350 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 SOX15O60248 233 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 PMP2P02689 132 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 SMIM18P0DKX4 95 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 EGR2P11161 476 aaPredicted RBP9.35□□□□□ -0.91
TPM1-216ENST00000558910 PSMB8P28062 276 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 PPIFP30405 207 aaKnown RBP9.35□□□□□ -0.91
TPM1-216ENST00000558910 DUTP33316 252 aaKnown RBP9.35□□□□□ -0.91
TPM1-216ENST00000558910 RAB9AP51151 201 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 TPPP2P59282 170 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 TAS2R20P59543 309 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 KRTAP10-11P60412 298 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 RPL30P62888 115 aaKnown RBP9.35□□□□□ -0.91
TPM1-216ENST00000558910 TNXAQ16473 311 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 ACTBL2Q562R1 376 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 UBE2NLQ5JXB2 153 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 TMEM69Q5SWH9 247 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 GPR107Q5VW38 600 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 ZNF660Q6AZW8 331 aaPredicted RBP9.35□□□□□ -0.91
TPM1-216ENST00000558910 KCTD9Q7L273 389 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 TMEM17Q86X19 198 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 WFDC3Q8IUB2 231 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 VKORC1L1Q8N0U8 176 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 ZNF645Q8N7E2 425 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.35□□□□□ -0.91
TPM1-216ENST00000558910 WFDC9Q8NEX5 89 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 ACOT12Q8WYK0 555 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 RCC1LQ96I51 464 aaKnown RBP9.35□□□□□ -0.91
TPM1-216ENST00000558910 KRTAP4-12Q9BQ66 201 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.35□□□□□ -0.91
TPM1-216ENST00000558910 CCL28Q9NRJ3 127 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 NECAP2Q9NVZ3 263 aa9.35□□□□□ -0.91
TPM1-216ENST00000558910 FOXA2Q9Y261 457 aaPredicted RBP9.35□□□□□ -0.91
TPM1-216ENST00000558910 FAM25AB3EWG3 89 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 FAM25CB3EWG5 89 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 FAM25GB3EWG6 89 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 IGLV2-23P01705 113 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 EIF4EP06730 217 aaKnown RBP9.34□□□□□ -0.91
TPM1-216ENST00000558910 CTXN2P0C2S0 81 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 CDX1P47902 265 aaPredicted RBP9.34□□□□□ -0.91
TPM1-216ENST00000558910 TMEM267Q0VDI3 215 aaPredicted RBP9.34□□□□□ -0.91
TPM1-216ENST00000558910 VMA21Q3ZAQ7 101 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 Q6ZS49 121 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 SSX9Q7RTT3 188 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 HOGA1Q86XE5 327 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 SNX29P2Q8IUI4 249 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 ZNF491Q8N8L2 437 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 OR1N2Q8NGR9 330 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 DPF1Q92782 380 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 P2RX4Q99571 388 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 TOLLIPQ9H0E2 274 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 VSIG4Q9Y279 399 aa9.34□□□□□ -0.91
TPM1-216ENST00000558910 RBMX2Q9Y388 322 aaKnown RBP9.34□□□□□ -0.91
TPM1-216ENST00000558910 ANKRD34BA5PLL1 514 aa9.33□□□□□ -0.92
TPM1-216ENST00000558910 MPPED1O15442 326 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms