RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 DLX4Q92988 240 aaPredicted RBP9.22□□□□□ -0.93
HERC1-202ENST00000558324 YTHDF1Q9BYJ9 559 aaKnown RBP9.22□□□□□ -0.93
HERC1-202ENST00000558324 CRYZL1O95825 349 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 NFYAP23511 347 aaPredicted RBP9.21□□□□□ -0.94
HERC1-202ENST00000558324 DTYMKP23919 212 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 LGALS7P47929 136 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 DEFA5Q01523 94 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 ARL6IP1Q15041 203 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 OR2B11Q5JQS5 317 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 HACD4Q5VWC8 232 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 IDO2Q6ZQW0 420 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 Q6ZS49 121 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 TPRA1Q86W33 373 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 POC5Q8NA72 575 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 OR5T1Q8NG75 326 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.21□□□□□ -0.94
HERC1-202ENST00000558324 RHBDL2Q9NX52 303 aa9.21□□□□□ -0.94
HERC1-202ENST00000558324 ZNF256Q9Y2P7 627 aaPredicted RBP9.21□□□□□ -0.94
HERC1-202ENST00000558324 SRRM4A7MD48 611 aaKnown RBP9.2□□□□□ -0.94
HERC1-202ENST00000558324 LINC00473A8K010 186 aa9.2□□□□□ -0.94
HERC1-202ENST00000558324 CRYGBP07316 175 aa9.2□□□□□ -0.94
HERC1-202ENST00000558324 CD36P16671 472 aa9.2□□□□□ -0.94
HERC1-202ENST00000558324 DUTP33316 252 aaKnown RBP9.2□□□□□ -0.94
HERC1-202ENST00000558324 SRSF7Q16629 238 aaKnown RBP eCLIP9.2□□□□□ -0.94
HERC1-202ENST00000558324 TMEM177Q53S58 311 aa9.2□□□□□ -0.94
HERC1-202ENST00000558324 IDNKQ5T6J7 187 aa9.2□□□□□ -0.94
HERC1-202ENST00000558324 OR5H6Q8NGV6 325 aa9.2□□□□□ -0.94
HERC1-202ENST00000558324 ADTRPQ96IZ2 230 aa9.2□□□□□ -0.94
HERC1-202ENST00000558324 PHB2Q99623 299 aa9.2□□□□□ -0.94
HERC1-202ENST00000558324 SLA2Q9H6Q3 261 aa9.2□□□□□ -0.94
HERC1-202ENST00000558324 C13orf42A0A1B0GVH6 325 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 ANKRD34BA5PLL1 514 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 SSX5O60225 188 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 TUSC2O75896 110 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 SCGNO76038 276 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 HSPB1P04792 205 aaKnown RBP9.19□□□□□ -0.94
HERC1-202ENST00000558324 FCER2P06734 321 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 RRASP10301 218 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 INSL3P51460 131 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 PITPNAQ00169 270 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 TAGLNQ01995 201 aaKnown RBP9.19□□□□□ -0.94
HERC1-202ENST00000558324 TNXAQ16473 311 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 VMA21Q3ZAQ7 101 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 KCTD9Q7L273 389 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 HAPLN4Q86UW8 402 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 ACOT12Q8WYK0 555 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 DDB2Q92466 427 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 SLC25A38Q96DW6 304 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 ASCL2Q99929 193 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 DCUN1D5Q9BTE7 237 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 CENPOQ9BU64 300 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 COA4Q9NYJ1 87 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 OR2W1Q9Y3N9 320 aa9.19□□□□□ -0.94
HERC1-202ENST00000558324 LSM4Q9Y4Z0 139 aaKnown RBP9.19□□□□□ -0.94
HERC1-202ENST00000558324 TRAV18A0A075B6X5 111 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 IGKV1D-13A0A0B4J2D9 117 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 MPPED1O15442 326 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 FCGR3BO75015 233 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 CTXN2P0C2S0 81 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 IGKV1-13P0DP09 117 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 PTHLHP12272 177 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 SPNP16150 400 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 UBE2KP61086 200 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 RPL30P62888 115 aaKnown RBP9.18□□□□□ -0.94
HERC1-202ENST00000558324 PRSS8Q16651 343 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 KCTD21Q4G0X4 260 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 ZNF429Q86V71 674 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 ZNF645Q8N7E2 425 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 RHOVQ96L33 236 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 DCSTAMPQ9H295 470 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 ANXA10Q9UJ72 324 aa9.18□□□□□ -0.94
HERC1-202ENST00000558324 MSGN1A6NI15 193 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 H3BUA1 57 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 HLA-DQB1P01920 261 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 SAA1P0DJI8 122 aaPredicted RBP9.17□□□□□ -0.94
HERC1-202ENST00000558324 TGFBR1P36897 503 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 ARPC4P59998 168 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 MRGPRG-AS1Q2M3A8 158 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 ACSM6Q6P461 480 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 CNIH2Q6PI25 160 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 GVQW1Q8N7I0 195 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 TEX45Q8NA69 505 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 OSR1Q8TAX0 266 aaPredicted RBP9.17□□□□□ -0.94
HERC1-202ENST00000558324 TCTEX1D2Q8WW35 142 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 SRSF12Q8WXF0 261 aaKnown RBP9.17□□□□□ -0.94
HERC1-202ENST00000558324 OR4C12Q96R67 309 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 GPHA2Q96T91 129 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 RSRP1Q9BUV0 290 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 TAS2R8Q9NYW2 309 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 SPATA2Q9UM82 520 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 MRPS7Q9Y2R9 242 aaKnown RBP9.17□□□□□ -0.94
HERC1-202ENST00000558324 RBMX2Q9Y388 322 aaKnown RBP9.17□□□□□ -0.94
HERC1-202ENST00000558324 ETV7Q9Y603 341 aa9.17□□□□□ -0.94
HERC1-202ENST00000558324 A0A0G2JLM5 398 aa9.16□□□□□ -0.94
HERC1-202ENST00000558324 ACTL6BO94805 426 aa9.16□□□□□ -0.94
HERC1-202ENST00000558324 IGLV2-14P01704 120 aa9.16□□□□□ -0.94
HERC1-202ENST00000558324 C10orf55Q5SWW7 151 aa9.16□□□□□ -0.94
HERC1-202ENST00000558324 VKORC1L1Q8N0U8 176 aa9.16□□□□□ -0.94
HERC1-202ENST00000558324 BEST4Q8NFU0 473 aa9.16□□□□□ -0.94
HERC1-202ENST00000558324 OR6Q1Q8NGQ2 317 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms