RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 WNT10AQ9GZT5 417 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 CLN8Q9UBY8 286 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 LAMTOR2Q9Y2Q5 125 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 OR2W1Q9Y3N9 320 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 ATP23Q9Y6H3 246 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 PCDH15Q96QU1 1955 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 TRAV38-1A0A0B4J264 116 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 PIGBOS1A0A0B4J2F0 54 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 SNURFLB1AK76 121 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 TRAPPC2LH3BP13 241 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 SIRPB1O00241 398 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 SLC17A3O00476 420 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 NPPCP23582 126 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 S100A7P31151 101 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 GNB1P62873 340 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 RBX1P62877 108 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 HTD2P86397 168 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 SRSF6Q13247 344 aaKnown RBP4.29□□□□□ -1.72
HMG20A-204ENST00000558288 ATP6V1FQ16864 119 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 ACSF3Q4G176 576 aaPredicted RBP4.29□□□□□ -1.72
HMG20A-204ENST00000558288 UNQ5815/PRO19632Q6UWF5 114 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 ASCL4Q6XD76 172 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 ERASQ7Z444 233 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 ANKRD37Q7Z713 158 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 ZNF843Q8N446 348 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 OR10P1Q8NGE3 313 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 OR10G8Q8NGN5 311 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 ZNF501Q96CX3 271 aaPredicted RBP4.29□□□□□ -1.72
HMG20A-204ENST00000558288 ALKBH7Q9BT30 221 aaPredicted RBP4.29□□□□□ -1.72
HMG20A-204ENST00000558288 FGF21Q9NSA1 209 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 OR1A1Q9P1Q5 309 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 UQCR10Q9UDW1 63 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 LOXL2Q9Y4K0 774 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 MYO9AB2RTY4 2548 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 UNC79Q9P2D8 2635 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 CFAP46Q8IYW2 2715 aa4.29□□□□□ -1.72
HMG20A-204ENST00000558288 LILRA5A6NI73 299 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 C3orf80F5H4A9 247 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 TNFSF11O14788 317 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 SH2D1BO14796 132 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 SYNGR3O43761 229 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 PDE6DO43924 150 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 IGKV1-39P01597 117 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 IGKV1-5P01602 117 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 IGKV1D-39P04432 117 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 SLC25A6P12236 298 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 NTF3P20783 257 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 CLDN15P56746 228 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 EDDM3BP56851 147 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 KLF3P57682 345 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-204ENST00000558288 SELENOTP62341 195 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 ARF1P84077 181 aaKnown RBP4.28□□□□□ -1.72
HMG20A-204ENST00000558288 PRDX4Q13162 271 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 C10orf128Q5T292 105 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 RHBDD2Q6NTF9 364 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 MKXQ8IYA7 352 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 ZNF738Q8NE65 137 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 TMEM147Q9BVK8 224 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 IL36GQ9NZH8 169 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 FBXL7Q9UJT9 491 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 TBL2Q9Y4P3 447 aaKnown RBP4.28□□□□□ -1.72
HMG20A-204ENST00000558288 A0A1W2PR77 199 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 C17orf112F2Z3M2 114 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 RBFOX2O43251 390 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMG20A-204ENST00000558288 YPEL1O60688 119 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 IGHV3-9P01782 118 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 CRYGSP22914 178 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 CCL7P80098 99 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 FOXL1Q12952 345 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 VAMP3Q15836 100 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 KIAA1644Q3SXP7 199 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 GCSAMLQ5JQS6 135 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 FAM27BQ5VT28 67 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 TMEM144Q7Z5S9 345 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 OR56B2PQ8NGI1 322 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 TMEM54Q969K7 222 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 ZNF488Q96MN9 340 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 YPEL2Q96QA6 119 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 RNF2Q99496 336 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 DEFB126Q9BYW3 111 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 LIN7CQ9NUP9 197 aaKnown RBP4.28□□□□□ -1.72
HMG20A-204ENST00000558288 NAT8BQ9UHF3 227 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 TP53TG3Q9ULZ0 132 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 TIMM9Q9Y5J7 89 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 hCG_38984A0A1B0GV85 526 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 A1L4Q6 167 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 NKX6-3A6NJ46 265 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 MLNRO43193 412 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 ZFAND5O76080 213 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 NDUFB8O95169 186 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 WNT2P09544 360 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 CD99P14209 185 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 PLA2G2AP14555 144 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 LHX2P50458 406 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 PSG4Q00888 419 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 ZNF816Q0VGE8 651 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-204ENST00000558288 HLA-DRB5Q30154 266 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 SLC25A53Q5H9E4 307 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 C20orf204Q6ZNR8 217 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 LSM10Q969L4 123 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms