RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 MAGT1Q9H0U3 335 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 WFDC1Q9HC57 220 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 RAB9BQ9NP90 201 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 FAM212BQ9NTI7 297 aaPredicted RBP6.02□□□□□ -1.45
SPG11-204ENST00000557866 LPAR3Q9UBY5 353 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 CACNG5Q9UF02 275 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 NSG2Q9Y328 171 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 ZFYVE26Q68DK2 2539 aa6.02□□□□□ -1.45
SPG11-204ENST00000557866 SPTBN1Q01082 2364 aaKnown RBP6.02□□□□□ -1.45
SPG11-204ENST00000557866 HRNRQ86YZ3 2850 aaPredicted RBP6.01□□□□□ -1.45
SPG11-204ENST00000557866 TRBV23-1A0A0A0MS06 115 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 KANTRA0A1W2PQU2 76 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 FAM24AA6NFZ4 105 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 C22orf46C9J442 243 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 F5H0A9 414 aaPredicted RBP6.01□□□□□ -1.45
SPG11-204ENST00000557866 OVOL3O00110 214 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 RAB29O14966 203 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 CHST1O43916 411 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 SSSCA1O60232 199 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 GPR137BO60478 399 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 SPDEFO95238 335 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 KRASP01116 189 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 P2RY1P47900 373 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 DLX1P56177 255 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 UBA52P62987 128 aaKnown RBP6.01□□□□□ -1.45
SPG11-204ENST00000557866 CATR1Q13166 79 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 NDUFA5Q16718 116 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 WDR25Q64LD2 544 aaPredicted RBP6.01□□□□□ -1.45
SPG11-204ENST00000557866 ALKAL2Q6UX46 152 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 OR8H3Q8N146 312 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 LYG1Q8N1E2 194 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 TCTEX1D1Q8N7M0 179 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 ZNF383Q8NA42 475 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.01□□□□□ -1.45
SPG11-204ENST00000557866 LY6G5BQ8NDX9 201 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 STOML3Q8TAV4 291 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 ZNF596Q8TC21 504 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 ZNF471Q9BX82 626 aaPredicted RBP6.01□□□□□ -1.45
SPG11-204ENST00000557866 GAL3ST2Q9H3Q3 398 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 CHODLQ9H9P2 273 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 PLEKHA2Q9HB19 425 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 ZFP57Q9NU63 452 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 FBXL17Q9UF56 701 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 UBQLN2Q9UHD9 624 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 MMP24Q9Y5R2 645 aa6.01□□□□□ -1.45
SPG11-204ENST00000557866 RAI1Q7Z5J4 1906 aaPredicted RBP6.01□□□□□ -1.45
SPG11-204ENST00000557866 A0A087X0M5 115 aa6□□□□□ -1.45
SPG11-204ENST00000557866 PIGBOS1A0A0B4J2F0 54 aa6□□□□□ -1.45
SPG11-204ENST00000557866 A0A1B0GX30 115 aa6□□□□□ -1.45
SPG11-204ENST00000557866 IGSF23A1L1A6 192 aa6□□□□□ -1.45
SPG11-204ENST00000557866 LINC00862A6NCI5 91 aa6□□□□□ -1.45
SPG11-204ENST00000557866 FCGR3BO75015 233 aa6□□□□□ -1.45
SPG11-204ENST00000557866 CT45A6P0DMU7 189 aa6□□□□□ -1.45
SPG11-204ENST00000557866 CT45A5P0DMU8 189 aa6□□□□□ -1.45
SPG11-204ENST00000557866 CT45A7P0DMV0 189 aa6□□□□□ -1.45
SPG11-204ENST00000557866 IGHV1-8P0DP01 117 aa6□□□□□ -1.45
SPG11-204ENST00000557866 MMP9P14780 707 aa6□□□□□ -1.45
SPG11-204ENST00000557866 NUP62P37198 522 aaPredicted RBP6□□□□□ -1.45
SPG11-204ENST00000557866 EFNA4P52798 201 aa6□□□□□ -1.45
SPG11-204ENST00000557866 AKR1C2P52895 323 aa6□□□□□ -1.45
SPG11-204ENST00000557866 TMEM33P57088 247 aa6□□□□□ -1.45
SPG11-204ENST00000557866 EWSR1Q01844 656 aaKnown RBP eCLIP6□□□□□ -1.45
SPG11-204ENST00000557866 NHLH2Q02577 135 aa6□□□□□ -1.45
SPG11-204ENST00000557866 PRB3Q04118 309 aaPredicted RBP6□□□□□ -1.45
SPG11-204ENST00000557866 CLLU1Q5K131 121 aa6□□□□□ -1.45
SPG11-204ENST00000557866 GPR157Q5UAW9 335 aa6□□□□□ -1.45
SPG11-204ENST00000557866 RPL7L1Q6DKI1 246 aaKnown RBP6□□□□□ -1.45
SPG11-204ENST00000557866 ZNF833PQ6ZTB9 187 aa6□□□□□ -1.45
SPG11-204ENST00000557866 LINC00311Q8N616 119 aa6□□□□□ -1.45
SPG11-204ENST00000557866 TMEM252Q8N6L7 170 aa6□□□□□ -1.45
SPG11-204ENST00000557866 LINC01356Q8N9X3 169 aa6□□□□□ -1.45
SPG11-204ENST00000557866 OR8B3Q8NGG8 313 aa6□□□□□ -1.45
SPG11-204ENST00000557866 RNASE11Q8TAA1 199 aaKnown RBP6□□□□□ -1.45
SPG11-204ENST00000557866 C8orf46Q8TAG6 207 aa6□□□□□ -1.45
SPG11-204ENST00000557866 CD300LFQ8TDQ1 290 aa6□□□□□ -1.45
SPG11-204ENST00000557866 SCARB1Q8WTV0 552 aa6□□□□□ -1.45
SPG11-204ENST00000557866 RAB1CQ92928 201 aa6□□□□□ -1.45
SPG11-204ENST00000557866 NEIL1Q96FI4 390 aaPredicted RBP6□□□□□ -1.45
SPG11-204ENST00000557866 OR8B2Q96RD0 313 aa6□□□□□ -1.45
SPG11-204ENST00000557866 MRPL20Q9BYC9 149 aaKnown RBP6□□□□□ -1.45
SPG11-204ENST00000557866 SMIM3Q9BZL3 60 aa6□□□□□ -1.45
SPG11-204ENST00000557866 PATZ1Q9HBE1 687 aaKnown RBP6□□□□□ -1.45
SPG11-204ENST00000557866 MIOXQ9UGB7 285 aa6□□□□□ -1.45
SPG11-204ENST00000557866 KLF2Q9Y5W3 355 aaPredicted RBP6□□□□□ -1.45
SPG11-204ENST00000557866 SESN1Q9Y6P5 492 aa6□□□□□ -1.45
SPG11-204ENST00000557866 ARID1AO14497 2285 aa6□□□□□ -1.45
SPG11-204ENST00000557866 DCHS2Q6V1P9 2916 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 LRBAP50851 2863 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 TANC2Q9HCD6 1990 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 J3QR06 171 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 TOR1AO14656 332 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 RBFOX2O43251 390 aaKnown RBP eCLIP5.99□□□□□ -1.45
SPG11-204ENST00000557866 HPRT1P00492 218 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 NMBP08949 121 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 OR9G9P0C7N8 305 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 KIR2DS2P43631 304 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 THBS3P49746 956 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 TLE4Q04727 773 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 DIAPH2-AS1Q14236 149 aa5.99□□□□□ -1.45
SPG11-204ENST00000557866 FAM74A1Q5RGS3 127 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms