RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 TRDV1A0A1B0GX56 115 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 SHISA3A0PJX4 238 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 ANKRD34BA5PLL1 514 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 TRIM64CA6NLI5 447 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 C3orf84H3BNL1 204 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 RAB27BO00194 218 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 FRMD6-AS1P0C7T7 363 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 TMEM177Q53S58 311 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 HAPLN4Q86UW8 402 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 ADTRPQ96IZ2 230 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 RCHY1Q96PM5 261 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 PHB2Q99623 299 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 COA4Q9NYJ1 87 aa11.24□□□□□ -0.61
SHMT2-235ENST00000557740 CRYZL1O95825 349 aa11.23□□□□□ -0.61
SHMT2-235ENST00000557740 CRYGBP07316 175 aa11.23□□□□□ -0.61
SHMT2-235ENST00000557740 AADACP22760 399 aa11.23□□□□□ -0.61
SHMT2-235ENST00000557740 SSBP2P81877 361 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-235ENST00000557740 DEFA5Q01523 94 aa11.23□□□□□ -0.61
SHMT2-235ENST00000557740 ARL6IP1Q15041 203 aa11.23□□□□□ -0.61
SHMT2-235ENST00000557740 C22orf42Q6IC83 251 aa11.23□□□□□ -0.61
SHMT2-235ENST00000557740 H1FOOQ8IZA3 346 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-235ENST00000557740 TINAGL1Q9GZM7 467 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-235ENST00000557740 ATG5Q9H1Y0 275 aa11.23□□□□□ -0.61
SHMT2-235ENST00000557740 ZMAT4Q9H898 229 aa11.23□□□□□ -0.61
SHMT2-235ENST00000557740 MPPED1O15442 326 aa11.22□□□□□ -0.61
SHMT2-235ENST00000557740 IGLV1-51P01701 117 aa11.22□□□□□ -0.61
SHMT2-235ENST00000557740 APELAP0DMC3 54 aa11.22□□□□□ -0.61
SHMT2-235ENST00000557740 GALP22466 123 aa11.22□□□□□ -0.61
SHMT2-235ENST00000557740 DTYMKP23919 212 aa11.22□□□□□ -0.61
SHMT2-235ENST00000557740 TNXAQ16473 311 aa11.22□□□□□ -0.61
SHMT2-235ENST00000557740 Q6ZS49 121 aa11.22□□□□□ -0.61
SHMT2-235ENST00000557740 SMIM30A4D0T7 59 aa11.21□□□□□ -0.61
SHMT2-235ENST00000557740 SRRM4A7MD48 611 aaKnown RBP11.21□□□□□ -0.61
SHMT2-235ENST00000557740 CREBL2O60519 120 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-235ENST00000557740 DUTP33316 252 aaKnown RBP11.21□□□□□ -0.61
SHMT2-235ENST00000557740 GABARAPL2P60520 117 aa11.21□□□□□ -0.61
SHMT2-235ENST00000557740 UBE2KP61086 200 aa11.21□□□□□ -0.61
SHMT2-235ENST00000557740 PRSS8Q16651 343 aa11.21□□□□□ -0.61
SHMT2-235ENST00000557740 SGPP2Q8IWX5 399 aa11.21□□□□□ -0.61
SHMT2-235ENST00000557740 TEX45Q8NA69 505 aa11.21□□□□□ -0.61
SHMT2-235ENST00000557740 MUC7Q8TAX7 377 aa11.21□□□□□ -0.61
SHMT2-235ENST00000557740 ACOT12Q8WYK0 555 aa11.21□□□□□ -0.61
SHMT2-235ENST00000557740 USMG5Q96IX5 58 aa11.21□□□□□ -0.61
SHMT2-235ENST00000557740 RAB26Q9ULW5 256 aa11.21□□□□□ -0.61
SHMT2-235ENST00000557740 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 MSGN1A6NI15 193 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 LINC00473A8K010 186 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 ACTL6BO94805 426 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 BRI3O95415 125 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 CD36P16671 472 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 PSMB9P28065 219 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 SYNJ2BPP57105 145 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 KLF5Q13887 457 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-235ENST00000557740 RPEL1Q2QD12 228 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 CDNFQ49AH0 187 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 IDO2Q6ZQW0 420 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 NR2C2APQ86WQ0 139 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 ZNF645Q8N7E2 425 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 OR9G4Q8NGQ1 327 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 OSR1Q8TAX0 266 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-235ENST00000557740 SRSF12Q8WXF0 261 aaKnown RBP11.2□□□□□ -0.62
SHMT2-235ENST00000557740 DDB2Q92466 427 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 ST6GALNAC5Q9BVH7 336 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
SHMT2-235ENST00000557740 ELF5Q9UKW6 265 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-235ENST00000557740 PRELID3BQ9Y3B1 194 aa11.2□□□□□ -0.62
SHMT2-235ENST00000557740 NOTOA8MTQ0 251 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 H0Y980 276 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 J3QRK9 145 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 MRPS14O60783 128 aaKnown RBP11.19□□□□□ -0.62
SHMT2-235ENST00000557740 SCGNO76038 276 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 CTXN2P0C2S0 81 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 OR9G9P0C7N8 305 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 SAA1P0DJI8 122 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-235ENST00000557740 IGHV4-30-4P0DP06 118 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 DYRK1AQ13627 763 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 TATDN3Q17R31 274 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 UBE2UQ5VVX9 321 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 HACD4Q5VWC8 232 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 ZNF343Q6P1L6 599 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 KCTD9Q7L273 389 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 ADAD2Q8NCV1 583 aaKnown RBP11.19□□□□□ -0.62
SHMT2-235ENST00000557740 DCUN1D5Q9BTE7 237 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 MRPS7Q9Y2R9 242 aaKnown RBP11.19□□□□□ -0.62
SHMT2-235ENST00000557740 OR2W1Q9Y3N9 320 aa11.19□□□□□ -0.62
SHMT2-235ENST00000557740 FAM223BA6NKX1 122 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 FCGR3BO75015 233 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 TUSC2O75896 110 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 SLC22A5O76082 557 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 GNG2P59768 71 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 RHOGP84095 191 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 EXOSC2Q13868 293 aaKnown RBP11.18□□□□□ -0.62
SHMT2-235ENST00000557740 CDK10Q15131 360 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 MRGPRG-AS1Q2M3A8 158 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 LCN12Q6JVE5 192 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 GTSCR1Q86UQ5 136 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 FAM223AQ8IWN6 122 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 NUDCD2Q8WVJ2 157 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms