RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 OR2D2Q9H210 308 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 TUBA4BQ9H853 241 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 COA4Q9NYJ1 87 aa12.11□□□□□ -0.47
SCFD1-224ENST00000557713 HYDINQ4G0P3 5121 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 BET1O15155 118 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 SHOXO15266 292 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 ARL6IP5O75915 188 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 DIRAS3O95661 229 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 IFNA6P05013 189 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 TRAM1Q15629 374 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 RPEL1Q2QD12 228 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 ADAD2Q8NCV1 583 aaKnown RBP12.1□□□□□ -0.47
SCFD1-224ENST00000557713 OR10J5Q8NHC4 309 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 DDB2Q92466 427 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 SCN3BQ9NY72 215 aa12.1□□□□□ -0.47
SCFD1-224ENST00000557713 TMEM272A0A1B0GTI8 110 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 OR2A4O95047 310 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 FCGR3AP08637 254 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 OR9G9P0C7N8 305 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 APELAP0DMC3 54 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 RRASP10301 218 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 CBX3Q13185 183 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 PRSS8Q16651 343 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 OR2K2Q8NGT1 345 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 SNAPC3Q92966 411 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 RAB22AQ9UL26 194 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 V9GY05 133 aa12.09□□□□□ -0.47
SCFD1-224ENST00000557713 HSMCR30P0CW71 290 aa12.08□□□□□ -0.48
SCFD1-224ENST00000557713 PSMA1P25786 263 aaKnown RBP12.08□□□□□ -0.48
SCFD1-224ENST00000557713 CALRP27797 417 aaKnown RBP12.08□□□□□ -0.48
SCFD1-224ENST00000557713 DUTP33316 252 aaKnown RBP12.08□□□□□ -0.48
SCFD1-224ENST00000557713 UBE2KP61086 200 aa12.08□□□□□ -0.48
SCFD1-224ENST00000557713 MRPS15P82914 257 aaKnown RBP12.08□□□□□ -0.48
SCFD1-224ENST00000557713 RTL8BQ17RB0 113 aa12.08□□□□□ -0.48
SCFD1-224ENST00000557713 RAB3CQ96E17 227 aa12.08□□□□□ -0.48
SCFD1-224ENST00000557713 PHB2Q99623 299 aa12.08□□□□□ -0.48
SCFD1-224ENST00000557713 DUSP21Q9H596 190 aa12.08□□□□□ -0.48
SCFD1-224ENST00000557713 AKIP1Q9NQ31 210 aa12.08□□□□□ -0.48
SCFD1-224ENST00000557713 PEMTQ9UBM1 199 aa12.08□□□□□ -0.48
SCFD1-224ENST00000557713 TRBV9A0A0B4J1U6 114 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 SHISA3A0PJX4 238 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 LINC00473A8K010 186 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 BMPR1BO00238 502 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 AIREO43918 545 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 RANBP1P43487 201 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 PSMD7P51665 324 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 FABP5Q01469 135 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 ZNF45Q02386 682 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 MLLT11Q13015 90 aaPredicted RBP12.07□□□□□ -0.48
SCFD1-224ENST00000557713 TNXAQ16473 311 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 VMA21Q3ZAQ7 101 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 HES5Q5TA89 166 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 OR10R2Q8NGX6 335 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 SRSF12Q8WXF0 261 aaKnown RBP12.07□□□□□ -0.48
SCFD1-224ENST00000557713 MAFIPQ8WZ33 124 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 HIPK2Q9H2X6 1198 aa12.07□□□□□ -0.48
SCFD1-224ENST00000557713 ZNF230Q9UIE0 474 aaPredicted RBP12.07□□□□□ -0.48
SCFD1-224ENST00000557713 PLECQ15149 4684 aaKnown RBP12.07□□□□□ -0.48
SCFD1-224ENST00000557713 A0A0B4J203 849 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 FAM223BA6NKX1 122 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 ZNF785A8K8V0 405 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 MFNGO00587 321 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 CRYZL1O95825 349 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 PRH1P02810 166 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 GNB3P16520 340 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 RHOGP84095 191 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 ATP5G2Q06055 141 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 IDO2Q6ZQW0 420 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 FAM223AQ8IWN6 122 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 ADTRPQ96IZ2 230 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 VCXQ9H320 206 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 RETNQ9HD89 108 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 TPRKBQ9Y3C4 175 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 DMRT1Q9Y5R6 373 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 CEPT1Q9Y6K0 416 aa12.06□□□□□ -0.48
SCFD1-224ENST00000557713 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.05□□□□□ -0.48
SCFD1-224ENST00000557713 RAB27BO00194 218 aa12.05□□□□□ -0.48
SCFD1-224ENST00000557713 EXOSC2Q13868 293 aaKnown RBP12.05□□□□□ -0.48
SCFD1-224ENST00000557713 CD300EQ496F6 205 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-224ENST00000557713 Q6ZS49 121 aa12.05□□□□□ -0.48
SCFD1-224ENST00000557713 LAX1Q8IWV1 398 aa12.05□□□□□ -0.48
SCFD1-224ENST00000557713 H1FOOQ8IZA3 346 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-224ENST00000557713 TTC9CQ8N5M4 171 aa12.05□□□□□ -0.48
SCFD1-224ENST00000557713 OSR1Q8TAX0 266 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-224ENST00000557713 NEURL2Q9BR09 285 aa12.05□□□□□ -0.48
SCFD1-224ENST00000557713 ZNF430Q9H8G1 570 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-224ENST00000557713 PLEKHA3Q9HB20 300 aa12.05□□□□□ -0.48
SCFD1-224ENST00000557713 ACOT13Q9NPJ3 140 aa12.05□□□□□ -0.48
SCFD1-224ENST00000557713 RBM7Q9Y580 266 aaKnown RBP12.05□□□□□ -0.48
SCFD1-224ENST00000557713 IGKV1D-8A0A087WSZ0 117 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 MPPED1O15442 326 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 RGS10O43665 173 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 HIST1H1DP16402 221 aaKnown RBP12.04□□□□□ -0.48
SCFD1-224ENST00000557713 GADD45AP24522 165 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 CD81P60033 236 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 DEFB114Q30KQ6 69 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 IL17DQ8TAD2 202 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 ACOT12Q8WYK0 555 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms