RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 RAB6AP20340 208 aa12.16□□□□□ -0.46
TUBB3-213ENST00000557262 AADACP22760 399 aa12.16□□□□□ -0.46
TUBB3-213ENST00000557262 HAPLN4Q86UW8 402 aa12.16□□□□□ -0.46
TUBB3-213ENST00000557262 TEX45Q8NA69 505 aa12.16□□□□□ -0.46
TUBB3-213ENST00000557262 MAFIPQ8WZ33 124 aa12.16□□□□□ -0.46
TUBB3-213ENST00000557262 USMG5Q96IX5 58 aa12.16□□□□□ -0.46
TUBB3-213ENST00000557262 TINAGL1Q9GZM7 467 aaPredicted RBP12.16□□□□□ -0.46
TUBB3-213ENST00000557262 MSGN1A6NI15 193 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 A8MZ25 164 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 IGHV4-30-4P0DP06 118 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 HIST1H1DP16402 221 aaKnown RBP12.15□□□□□ -0.46
TUBB3-213ENST00000557262 TALDO1P37837 337 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 OR10A3P58181 314 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 ARFRP1Q13795 201 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 TBCEQ15813 527 aaPredicted RBP12.15□□□□□ -0.46
TUBB3-213ENST00000557262 SSX1Q16384 188 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 TATDN3Q17R31 274 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 ZNF343Q6P1L6 599 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 OR9G4Q8NGQ1 327 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 C5orf30Q96GV9 206 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 ADTRPQ96IZ2 230 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 GINS4Q9BRT9 223 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 C19orf73Q9NVV2 129 aa12.15□□□□□ -0.46
TUBB3-213ENST00000557262 PEF1Q9UBV8 284 aaKnown RBP12.15□□□□□ -0.46
TUBB3-213ENST00000557262 TRDV1A0A1B0GX56 115 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 SHISA3A0PJX4 238 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 H0Y980 276 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 RAB3BP20337 219 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 MYL9P24844 172 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 DUTP33316 252 aaKnown RBP12.14□□□□□ -0.47
TUBB3-213ENST00000557262 MRGPRG-AS1Q2M3A8 158 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 VMA21Q3ZAQ7 101 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 IL34Q6ZMJ4 242 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 Q6ZS49 121 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 ZNF367Q7RTV3 350 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 SGPP2Q8IWX5 399 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 H1FOOQ8IZA3 346 aaPredicted RBP12.14□□□□□ -0.47
TUBB3-213ENST00000557262 DDB2Q92466 427 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 PHB2Q99623 299 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 TM2D3Q9BRN9 247 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 COA4Q9NYJ1 87 aa12.14□□□□□ -0.47
TUBB3-213ENST00000557262 LYL1P12980 280 aa12.13□□□□□ -0.47
TUBB3-213ENST00000557262 SYNJ2BPP57105 145 aa12.13□□□□□ -0.47
TUBB3-213ENST00000557262 UBE2KP61086 200 aa12.13□□□□□ -0.47
TUBB3-213ENST00000557262 ARL6IP1Q15041 203 aa12.13□□□□□ -0.47
TUBB3-213ENST00000557262 PRSS8Q16651 343 aa12.13□□□□□ -0.47
TUBB3-213ENST00000557262 CITED4Q96RK1 184 aa12.13□□□□□ -0.47
TUBB3-213ENST00000557262 VCX3BQ9H321 246 aa12.13□□□□□ -0.47
TUBB3-213ENST00000557262 NDUFB11Q9NX14 153 aa12.13□□□□□ -0.47
TUBB3-213ENST00000557262 BLOC1S6Q9UL45 172 aa12.13□□□□□ -0.47
TUBB3-213ENST00000557262 IGKV1D-8A0A087WSZ0 117 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 LINC00473A8K010 186 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 CRYZL1O95825 349 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 OR9G9P0C7N8 305 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 APELAP0DMC3 54 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 GALP22466 123 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 HSPA13P48723 471 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 DYRK1AQ13627 763 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 TNXAQ16473 311 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 CDNFQ49AH0 187 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 ADAD2Q8NCV1 583 aaKnown RBP12.12□□□□□ -0.47
TUBB3-213ENST00000557262 OSR1Q8TAX0 266 aaPredicted RBP12.12□□□□□ -0.47
TUBB3-213ENST00000557262 SNAPC3Q92966 411 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 CNBD2Q96M20 576 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 ATG5Q9H1Y0 275 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 SIGLEC8Q9NYZ4 499 aa12.12□□□□□ -0.47
TUBB3-213ENST00000557262 DYNC2H1Q8NCM8 4307 aaKnown RBP12.11□□□□□ -0.47
TUBB3-213ENST00000557262 A0A0B4J203 849 aa12.11□□□□□ -0.47
TUBB3-213ENST00000557262 TRBV12-3P01733 135 aa12.11□□□□□ -0.47
TUBB3-213ENST00000557262 CSN3P07498 182 aa12.11□□□□□ -0.47
TUBB3-213ENST00000557262 DTYMKP23919 212 aa12.11□□□□□ -0.47
TUBB3-213ENST00000557262 DEFA5Q01523 94 aa12.11□□□□□ -0.47
TUBB3-213ENST00000557262 RPEL1Q2QD12 228 aa12.11□□□□□ -0.47
TUBB3-213ENST00000557262 SRSF12Q8WXF0 261 aaKnown RBP12.11□□□□□ -0.47
TUBB3-213ENST00000557262 ST6GALNAC5Q9BVH7 336 aa12.11□□□□□ -0.47
TUBB3-213ENST00000557262 ELF5Q9UKW6 265 aaPredicted RBP12.11□□□□□ -0.47
TUBB3-213ENST00000557262 RYR2Q92736 4967 aa12.11□□□□□ -0.47
TUBB3-213ENST00000557262 MPPED1O15442 326 aa12.1□□□□□ -0.47
TUBB3-213ENST00000557262 RBMXL2O75526 392 aaKnown RBP12.1□□□□□ -0.47
TUBB3-213ENST00000557262 CTXN2P0C2S0 81 aa12.1□□□□□ -0.47
TUBB3-213ENST00000557262 C22orf42Q6IC83 251 aa12.1□□□□□ -0.47
TUBB3-213ENST00000557262 IZUMO2Q6UXV1 221 aa12.1□□□□□ -0.47
TUBB3-213ENST00000557262 IDO2Q6ZQW0 420 aa12.1□□□□□ -0.47
TUBB3-213ENST00000557262 ACOT12Q8WYK0 555 aa12.1□□□□□ -0.47
TUBB3-213ENST00000557262 DCUN1D5Q9BTE7 237 aa12.1□□□□□ -0.47
TUBB3-213ENST00000557262 PALMDQ9NP74 551 aa12.1□□□□□ -0.47
TUBB3-213ENST00000557262 ADAM30Q9UKF2 790 aa12.1□□□□□ -0.47
TUBB3-213ENST00000557262 OR2W1Q9Y3N9 320 aa12.1□□□□□ -0.47
TUBB3-213ENST00000557262 FAM223BA6NKX1 122 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 J3QRK9 145 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 CREBL2O60519 120 aaPredicted RBP12.09□□□□□ -0.47
TUBB3-213ENST00000557262 SLC22A5O76082 557 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 ACTL6BO94805 426 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 OR2A4O95047 310 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 RHOGP84095 191 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 ATP5G2Q06055 141 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 CDK10Q15131 360 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 LCN12Q6JVE5 192 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 NR2C2APQ86WQ0 139 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 FAM223AQ8IWN6 122 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms