RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 C4orf3Q8WVX3 66 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 ARPC1AQ92747 370 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 SLC25A46Q96AG3 418 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 KLK15Q9H2R5 256 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 ZNF355PQ9NSJ1 428 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 COMMD3Q9UBI1 195 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 FOXA2Q9Y261 457 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-213ENST00000554600 MRPS7Q9Y2R9 242 aaKnown RBP8.33□□□□□ -1.08
SHMT2-213ENST00000554600 PRELID3BQ9Y3B1 194 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 IGKV1D-13A0A0B4J2D9 117 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 SMIM31A0A1B0GVY4 71 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 LINC00473A8K010 186 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 FCGR3BO75015 233 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 SLC22A5O76082 557 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 DUS4LO95620 317 aaKnown RBP8.32□□□□□ -1.08
SHMT2-213ENST00000554600 HLA-DQB1P01920 261 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 IGKV1-13P0DP09 117 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 FCGR2CP31995 323 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 RAB9AP51151 201 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 FXYD4P59646 89 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 TMEM177Q53S58 311 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 ZNF562Q6V9R5 426 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 REC114Q7Z4M0 266 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 GPR141Q7Z602 305 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 HOGA1Q86XE5 327 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 ANKRD13BQ86YJ7 626 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 TCTEX1D1Q8N7M0 179 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 TCTEX1D2Q8WW35 142 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 KCTD12Q96CX2 325 aaKnown RBP8.32□□□□□ -1.08
SHMT2-213ENST00000554600 MS4A10Q96PG2 267 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 P2RX4Q99571 388 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 MCRIP2Q9BUT9 160 aaKnown RBP8.32□□□□□ -1.08
SHMT2-213ENST00000554600 GPR61Q9BZJ8 451 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 GNB4Q9HAV0 340 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 NECAP2Q9NVZ3 263 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 TAS2R8Q9NYW2 309 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 VSIG4Q9Y279 399 aa8.32□□□□□ -1.08
SHMT2-213ENST00000554600 RBMX2Q9Y388 322 aaKnown RBP8.32□□□□□ -1.08
SHMT2-213ENST00000554600 IGLV1-40P01703 118 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 IGLV2-23P01705 113 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 EIF4EP06730 217 aaKnown RBP8.31□□□□□ -1.08
SHMT2-213ENST00000554600 AADACP22760 399 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 HOXD3P31249 432 aaPredicted RBP8.31□□□□□ -1.08
SHMT2-213ENST00000554600 ALDH3B2P48448 385 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 TPPP2P59282 170 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 TAS2R20P59543 309 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 HERV-K104P61576 105 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 PJVKQ0ZLH3 352 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 TNXAQ16473 311 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 GPR107Q5VW38 600 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 ZNF491Q8N8L2 437 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 MINDY2Q8NBR6 621 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 OR11H1Q8NG94 326 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 OR5M8Q8NGP6 311 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 MRAPQ8TCY5 172 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 ACOT12Q8WYK0 555 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 UBE2E2Q96LR5 201 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 PHB2Q99623 299 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 NAA50Q9GZZ1 169 aaKnown RBP8.31□□□□□ -1.08
SHMT2-213ENST00000554600 NUBP2Q9Y5Y2 271 aa8.31□□□□□ -1.08
SHMT2-213ENST00000554600 SRRM4A7MD48 611 aaKnown RBP8.3□□□□□ -1.08
SHMT2-213ENST00000554600 FAM25AB3EWG3 89 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 FAM25CB3EWG5 89 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 FAM25GB3EWG6 89 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 ARPC1BO15143 372 aaKnown RBP8.3□□□□□ -1.08
SHMT2-213ENST00000554600 MPPED1O15442 326 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 TNFSF12O43508 249 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 SOX15O60248 233 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 ACTL6BO94805 426 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 GABARAPO95166 117 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 PPYP01298 95 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 IGHV3-11P01762 117 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 TRGV3P03979 118 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 APELAP0DMC3 54 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 EGR2P11161 476 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-213ENST00000554600 PRSS3P35030 304 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 RORCP51449 518 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 CRIP2P52943 208 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-213ENST00000554600 RPL30P62888 115 aaKnown RBP8.3□□□□□ -1.08
SHMT2-213ENST00000554600 CDK10Q15131 360 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 AKIRIN2Q53H80 203 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 PYHIN1Q6K0P9 492 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 MZT2AQ6P582 158 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 IDO2Q6ZQW0 420 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 TMEM17Q86X19 198 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 SNX29P2Q8IUI4 249 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 OR5T1Q8NG75 326 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 OR5AP2Q8NGF4 316 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 OR1N2Q8NGR9 330 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 OSR1Q8TAX0 266 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-213ENST00000554600 DDB2Q92466 427 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 SNAPC3Q92966 411 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 GPHA2Q96T91 129 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 HSD17B10Q99714 261 aaKnown RBP8.3□□□□□ -1.08
SHMT2-213ENST00000554600 SLC5A7Q9GZV3 580 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 CCL28Q9NRJ3 127 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 AURKAIP1Q9NWT8 199 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-213ENST00000554600 EHFQ9NZC4 300 aa8.3□□□□□ -1.08
SHMT2-213ENST00000554600 HPGDSO60760 199 aa8.29□□□□□ -1.08
SHMT2-213ENST00000554600 APOA1P02647 267 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms