RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 DGCR2P98153 550 aa14.06□□□□□ -0.16
SHMT2-206ENST00000553529 KCTD21Q4G0X4 260 aa14.06□□□□□ -0.16
SHMT2-206ENST00000553529 C10orf55Q5SWW7 151 aa14.06□□□□□ -0.16
SHMT2-206ENST00000553529 ZNF562Q6V9R5 426 aa14.06□□□□□ -0.16
SHMT2-206ENST00000553529 C19orf35Q6ZS72 473 aa14.06□□□□□ -0.16
SHMT2-206ENST00000553529 TPRA1Q86W33 373 aa14.06□□□□□ -0.16
SHMT2-206ENST00000553529 VKORC1L1Q8N0U8 176 aa14.06□□□□□ -0.16
SHMT2-206ENST00000553529 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-206ENST00000553529 DPF1Q92782 380 aa14.06□□□□□ -0.16
SHMT2-206ENST00000553529 TSNAXQ99598 290 aaKnown RBP14.06□□□□□ -0.16
SHMT2-206ENST00000553529 MCRIP2Q9BUT9 160 aaKnown RBP14.06□□□□□ -0.16
SHMT2-206ENST00000553529 TRAV18A0A075B6X5 111 aa14.05□□□□□ -0.16
SHMT2-206ENST00000553529 SHOXO15266 292 aa14.05□□□□□ -0.16
SHMT2-206ENST00000553529 DTYMKP23919 212 aa14.05□□□□□ -0.16
SHMT2-206ENST00000553529 BRWD1-AS2P59051 145 aa14.05□□□□□ -0.16
SHMT2-206ENST00000553529 GNG2P59768 71 aa14.05□□□□□ -0.16
SHMT2-206ENST00000553529 Q6ZS49 121 aa14.05□□□□□ -0.16
SHMT2-206ENST00000553529 RNF5Q99942 180 aa14.05□□□□□ -0.16
SHMT2-206ENST00000553529 GHITMQ9H3K2 345 aa14.05□□□□□ -0.16
SHMT2-206ENST00000553529 TUSC2O75896 110 aa14.04□□□□□ -0.16
SHMT2-206ENST00000553529 SPDEFO95238 335 aa14.04□□□□□ -0.16
SHMT2-206ENST00000553529 TRBV12-3P01733 135 aa14.04□□□□□ -0.16
SHMT2-206ENST00000553529 PRH1P02810 166 aa14.04□□□□□ -0.16
SHMT2-206ENST00000553529 TRGV3P03979 118 aa14.04□□□□□ -0.16
SHMT2-206ENST00000553529 LGALS1P09382 135 aaKnown RBP14.04□□□□□ -0.16
SHMT2-206ENST00000553529 RUNX1Q01196 453 aa14.04□□□□□ -0.16
SHMT2-206ENST00000553529 TMEM177Q53S58 311 aa14.04□□□□□ -0.16
SHMT2-206ENST00000553529 C9orf66Q5T8R8 295 aa14.04□□□□□ -0.16
SHMT2-206ENST00000553529 YIPF6Q96EC8 236 aa14.04□□□□□ -0.16
SHMT2-206ENST00000553529 ZNF355PQ9NSJ1 428 aa14.04□□□□□ -0.16
SHMT2-206ENST00000553529 COL7A1Q02388 2944 aa14.03□□□□□ -0.16
SHMT2-206ENST00000553529 ANKRD34BA5PLL1 514 aa14.03□□□□□ -0.16
SHMT2-206ENST00000553529 TNFSF12O43508 249 aa14.03□□□□□ -0.16
SHMT2-206ENST00000553529 FCGR3BO75015 233 aa14.03□□□□□ -0.16
SHMT2-206ENST00000553529 MYOD1P15172 320 aa14.03□□□□□ -0.16
SHMT2-206ENST00000553529 EIF4EBP1Q13541 118 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-206ENST00000553529 SRSF7Q16629 238 aaKnown RBP eCLIP14.03□□□□□ -0.16
SHMT2-206ENST00000553529 AKIRIN2Q53H80 203 aa14.03□□□□□ -0.16
SHMT2-206ENST00000553529 ANXA10Q9UJ72 324 aa14.03□□□□□ -0.16
SHMT2-206ENST00000553529 SPATA2Q9UM82 520 aa14.03□□□□□ -0.16
SHMT2-206ENST00000553529 LINC01619G3V211 115 aa14.02□□□□□ -0.17
SHMT2-206ENST00000553529 OVOL1O14753 267 aa14.02□□□□□ -0.17
SHMT2-206ENST00000553529 CNIH1O95406 144 aa14.02□□□□□ -0.17
SHMT2-206ENST00000553529 OR8U8P0C7N1 319 aa14.02□□□□□ -0.17
SHMT2-206ENST00000553529 SAA1P0DJI8 122 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-206ENST00000553529 RPS19P39019 145 aaKnown RBP14.02□□□□□ -0.17
SHMT2-206ENST00000553529 TNXAQ16473 311 aa14.02□□□□□ -0.17
SHMT2-206ENST00000553529 ZNF645Q8N7E2 425 aa14.02□□□□□ -0.17
SHMT2-206ENST00000553529 SNAPC3Q92966 411 aa14.02□□□□□ -0.17
SHMT2-206ENST00000553529 RHOVQ96L33 236 aa14.02□□□□□ -0.17
SHMT2-206ENST00000553529 ASCL2Q99929 193 aa14.02□□□□□ -0.17
SHMT2-206ENST00000553529 RBMX2Q9Y388 322 aaKnown RBP14.02□□□□□ -0.17
SHMT2-206ENST00000553529 OR2W1Q9Y3N9 320 aa14.02□□□□□ -0.17
SHMT2-206ENST00000553529 LSM4Q9Y4Z0 139 aaKnown RBP14.02□□□□□ -0.17
SHMT2-206ENST00000553529 HLA-DQB1P01920 261 aa14.01□□□□□ -0.17
SHMT2-206ENST00000553529 AADACP22760 399 aa14.01□□□□□ -0.17
SHMT2-206ENST00000553529 RTL8BQ17RB0 113 aa14.01□□□□□ -0.17
SHMT2-206ENST00000553529 POC5Q8NA72 575 aa14.01□□□□□ -0.17
SHMT2-206ENST00000553529 GPR61Q9BZJ8 451 aa14.01□□□□□ -0.17
SHMT2-206ENST00000553529 ZNF430Q9H8G1 570 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-206ENST00000553529 CCL28Q9NRJ3 127 aa14.01□□□□□ -0.17
SHMT2-206ENST00000553529 TAS2R8Q9NYW2 309 aa14.01□□□□□ -0.17
SHMT2-206ENST00000553529 A0A1B0GW64 132 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 MSGN1A6NI15 193 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 E7EUB6 86 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 SAP30O75446 220 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 DIRAS3O95661 229 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 LY86O95711 162 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 NCS1P62166 190 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 CD69Q07108 199 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 TMEM267Q0VDI3 215 aaPredicted RBP14□□□□□ -0.17
SHMT2-206ENST00000553529 PRSS8Q16651 343 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 CNIH2Q6PI25 160 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 KCTD9Q7L273 389 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 TCTEX1D1Q8N7M0 179 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 BEST4Q8NFU0 473 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 TSPAN14Q8NG11 270 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 ACOT12Q8WYK0 555 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 DCSTAMPQ9H295 470 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 AUNIPQ9H7T9 357 aa14□□□□□ -0.17
SHMT2-206ENST00000553529 HMX3A6NHT5 357 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 AIREO43918 545 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 SPNP16150 400 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 FCGR2CP31995 323 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 RANBP1P43487 201 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 LGALS7P47929 136 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 UBE2KP61086 200 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 ZNF45Q02386 682 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 DYRK1AQ13627 763 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 SECTM1Q8WVN6 248 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 SRSF12Q8WXF0 261 aaKnown RBP13.99□□□□□ -0.17
SHMT2-206ENST00000553529 B9D2Q9BPU9 175 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 DCUN1D5Q9BTE7 237 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 COA4Q9NYJ1 87 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 ZNF256Q9Y2P7 627 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-206ENST00000553529 ETV7Q9Y603 341 aa13.99□□□□□ -0.17
SHMT2-206ENST00000553529 HUWE1Q7Z6Z7 4374 aaKnown RBP13.98□□□□□ -0.17
SHMT2-206ENST00000553529 RAMP3O60896 148 aa13.98□□□□□ -0.17
SHMT2-206ENST00000553529 FXYD4P59646 89 aa13.98□□□□□ -0.17
SHMT2-206ENST00000553529 HOGA1Q86XE5 327 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms