RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 MFNGO00587 321 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 CREBL2O60519 120 aaPredicted RBP9.81□□□□□ -0.84
LINC00643-202ENST00000553426 IGLV2-23P01705 113 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 GALP22466 123 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 OR10A3P58181 314 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 PLA2G7Q13093 441 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 SSX1Q16384 188 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 SRSF7Q16629 238 aaKnown RBP eCLIP9.81□□□□□ -0.84
LINC00643-202ENST00000553426 TMEM177Q53S58 311 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 BVESQ8NE79 360 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 MAFIPQ8WZ33 124 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 ATG5Q9H1Y0 275 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 COA4Q9NYJ1 87 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 RAB26Q9ULW5 256 aa9.81□□□□□ -0.84
LINC00643-202ENST00000553426 ANKRD34BA5PLL1 514 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 MPPED1O15442 326 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 MRPS14O60783 128 aaKnown RBP9.8□□□□□ -0.84
LINC00643-202ENST00000553426 ACTL6BO94805 426 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 CTXN2P0C2S0 81 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 FRMD6-AS1P0C7T7 363 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 PJVKQ0ZLH3 352 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 Q6ZS49 121 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 OVCH2Q7RTZ1 564 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 SBSPONQ8IVN8 264 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 TEX45Q8NA69 505 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 USMG5Q96IX5 58 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 RCHY1Q96PM5 261 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 DNAH1Q9P2D7 4330 aa9.8□□□□□ -0.84
LINC00643-202ENST00000553426 SCGNO76038 276 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 SLC22A5O76082 557 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 BRI3O95415 125 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 CRYZL1O95825 349 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 CRYGBP07316 175 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 SNRPBP14678 240 aaKnown RBP9.79□□□□□ -0.84
LINC00643-202ENST00000553426 DTYMKP23919 212 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 DUTP33316 252 aaKnown RBP9.79□□□□□ -0.84
LINC00643-202ENST00000553426 GABARAPL2P60520 117 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 UBE2KP61086 200 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 TNXAQ16473 311 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 C22orf42Q6IC83 251 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 SGPP2Q8IWX5 399 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 H1FOOQ8IZA3 346 aaPredicted RBP9.79□□□□□ -0.84
LINC00643-202ENST00000553426 OSR1Q8TAX0 266 aaPredicted RBP9.79□□□□□ -0.84
LINC00643-202ENST00000553426 DCUN1D5Q9BTE7 237 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 TINAGL1Q9GZM7 467 aaPredicted RBP9.79□□□□□ -0.84
LINC00643-202ENST00000553426 PEF1Q9UBV8 284 aaKnown RBP9.79□□□□□ -0.84
LINC00643-202ENST00000553426 MRPS7Q9Y2R9 242 aaKnown RBP9.79□□□□□ -0.84
LINC00643-202ENST00000553426 PRELID3BQ9Y3B1 194 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 STAB2Q8WWQ8 2551 aa9.79□□□□□ -0.84
LINC00643-202ENST00000553426 DNAH7Q8WXX0 4024 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 A0A0B4J203 849 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 MSGN1A6NI15 193 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 TRIM64CA6NLI5 447 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 SRRM4A7MD48 611 aaKnown RBP9.78□□□□□ -0.84
LINC00643-202ENST00000553426 H0Y980 276 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 IGLV1-51P01701 117 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 CD36P16671 472 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 PRSS8Q16651 343 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 CDNFQ49AH0 187 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 OR9G4Q8NGQ1 327 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 ACOT12Q8WYK0 555 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 SNAPC3Q92966 411 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 ST6GALNAC5Q9BVH7 336 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 DCSTAMPQ9H295 470 aa9.78□□□□□ -0.84
LINC00643-202ENST00000553426 HUWE1Q7Z6Z7 4374 aaKnown RBP9.77□□□□□ -0.84
LINC00643-202ENST00000553426 SHISA3A0PJX4 238 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 NOTOA8MTQ0 251 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 APELAP0DMC3 54 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 PSMB9P28065 219 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 SYNJ2BPP57105 145 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 SSBP2P81877 361 aaPredicted RBP9.77□□□□□ -0.85
LINC00643-202ENST00000553426 KLF5Q13887 457 aaPredicted RBP9.77□□□□□ -0.85
LINC00643-202ENST00000553426 RPEL1Q2QD12 228 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 HACD4Q5VWC8 232 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 ZNF343Q6P1L6 599 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 TPRA1Q86W33 373 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 MMD2Q8IY49 270 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 ZNF645Q8N7E2 425 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 MUC7Q8TAX7 377 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 SRSF12Q8WXF0 261 aaKnown RBP9.77□□□□□ -0.85
LINC00643-202ENST00000553426 C5orf30Q96GV9 206 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 SPIN2AQ99865 258 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 SPIN2BQ9BPZ2 258 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 Q9H521 79 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 OR2W1Q9Y3N9 320 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 HYDINQ4G0P3 5121 aa9.77□□□□□ -0.85
LINC00643-202ENST00000553426 FAM223BA6NKX1 122 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 LINC00473A8K010 186 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 J3QRK9 145 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 FCGR3BO75015 233 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 TUSC2O75896 110 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 FGF9P31371 208 aaPredicted RBP9.76□□□□□ -0.85
LINC00643-202ENST00000553426 GNG2P59768 71 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 ATP5G2Q06055 141 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 FAM209BQ5JX69 171 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 UBE2UQ5VVX9 321 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 CNIH2Q6PI25 160 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 IDO2Q6ZQW0 420 aa9.76□□□□□ -0.85
LINC00643-202ENST00000553426 KCTD9Q7L273 389 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms