RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CLEC2LP0C7M8 214 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 DUTP33316 252 aaKnown RBP10.04□□□□□ -0.8
ACTN1-207ENST00000553290 TIMM50Q3ZCQ8 353 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 IDNKQ5T6J7 187 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 ASPHD1Q5U4P2 390 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 ZNF645Q8N7E2 425 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 GRPEL2Q8TAA5 225 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 CASTOR1Q8WTX7 329 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 DDB2Q92466 427 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 TMEM68Q96MH6 324 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 RNF167Q9H6Y7 350 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 SCOCQ9UIL1 159 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 ANXA10Q9UJ72 324 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 OR2W1Q9Y3N9 320 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 LINC01619G3V211 115 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 H3BUA1 57 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 OVOL1O14753 267 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 SSX5O60225 188 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 NFYAP23511 347 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-207ENST00000553290 TPPP2P59282 170 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 VMA21Q3ZAQ7 101 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 TEX45Q8NA69 505 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 OR5H6Q8NGV6 325 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 OSR1Q8TAX0 266 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-207ENST00000553290 DCUN1D4Q92564 292 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 SLC25A38Q96DW6 304 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 MS4A10Q96PG2 267 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 ALX4Q9H161 411 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-207ENST00000553290 VCX3AQ9NNX9 186 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 DIABLOQ9NR28 239 aa10.03□□□□□ -0.8
ACTN1-207ENST00000553290 COL7A1Q02388 2944 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 TRAV18A0A075B6X5 111 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 SRRM4A7MD48 611 aaKnown RBP10.02□□□□□ -0.81
ACTN1-207ENST00000553290 LINC00473A8K010 186 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 CRYZL1O95825 349 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 TRGV3P03979 118 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 HSPB1P04792 205 aaKnown RBP10.02□□□□□ -0.81
ACTN1-207ENST00000553290 ECI1P42126 302 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 UBE2KP61086 200 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 SSBP2P81877 361 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-207ENST00000553290 CD69Q07108 199 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 PJVKQ0ZLH3 352 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 ZNF429Q86V71 674 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 CROCCP3Q8IVE0 287 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 POC5Q8NA72 575 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 RHOVQ96L33 236 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 ZNF355PQ9NSJ1 428 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 SPATA2Q9UM82 520 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 PRELID3BQ9Y3B1 194 aa10.02□□□□□ -0.81
ACTN1-207ENST00000553290 IGHV4OR15-8A0A075B7B6 117 aa10.01□□□□□ -0.81
ACTN1-207ENST00000553290 A0A087WW49 117 aa10.01□□□□□ -0.81
ACTN1-207ENST00000553290 A0A087WXM4 84 aa10.01□□□□□ -0.81
ACTN1-207ENST00000553290 A0A0G2JLM5 398 aa10.01□□□□□ -0.81
ACTN1-207ENST00000553290 J3QRK9 145 aa10.01□□□□□ -0.81
ACTN1-207ENST00000553290 TNFAIP8O95379 198 aa10.01□□□□□ -0.81
ACTN1-207ENST00000553290 IGHV3-11P01762 117 aa10.01□□□□□ -0.81
ACTN1-207ENST00000553290 TSPAN14Q8NG11 270 aa10.01□□□□□ -0.81
ACTN1-207ENST00000553290 OR5T1Q8NG75 326 aa10.01□□□□□ -0.81
ACTN1-207ENST00000553290 DLX4Q92988 240 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-207ENST00000553290 HSD17B10Q99714 261 aaKnown RBP10.01□□□□□ -0.81
ACTN1-207ENST00000553290 B9D2Q9BPU9 175 aa10.01□□□□□ -0.81
ACTN1-207ENST00000553290 MRPS7Q9Y2R9 242 aaKnown RBP10.01□□□□□ -0.81
ACTN1-207ENST00000553290 RBMX2Q9Y388 322 aaKnown RBP10.01□□□□□ -0.81
ACTN1-207ENST00000553290 IGKV1D-13A0A0B4J2D9 117 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 C13orf42A0A1B0GVH6 325 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 AIREO43918 545 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 CREBL2O60519 120 aaPredicted RBP10□□□□□ -0.81
ACTN1-207ENST00000553290 FCGR3BO75015 233 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 TUSC2O75896 110 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 BRI3O95415 125 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 IGKV1-13P0DP09 117 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 SLURP1P55000 103 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 ARPC4P59998 168 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 KCTD9Q7L273 389 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 OVCH2Q7RTZ1 564 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 BEST4Q8NFU0 473 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 PRR25Q96S07 402 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 PHB2Q99623 299 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 DCUN1D5Q9BTE7 237 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 AUNIPQ9H7T9 357 aa10□□□□□ -0.81
ACTN1-207ENST00000553290 ZNF256Q9Y2P7 627 aaPredicted RBP10□□□□□ -0.81
ACTN1-207ENST00000553290 SAP30O75446 220 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 IGLV2-14P01704 120 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 AADACP22760 399 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 CBX5P45973 191 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 CDK10Q15131 360 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 TNXAQ16473 311 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 PRSS8Q16651 343 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 MRGPRG-AS1Q2M3A8 158 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 VAX1Q5SQQ9 334 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 HOGA1Q86XE5 327 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 GVQW1Q8N7I0 195 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 YIPF6Q96EC8 236 aa9.99□□□□□ -0.81
ACTN1-207ENST00000553290 S100A16Q96FQ6 103 aaKnown RBP9.99□□□□□ -0.81
ACTN1-207ENST00000553290 TINAGL1Q9GZM7 467 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-207ENST00000553290 RANGRFQ9HD47 186 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-207ENST00000553290 LSM4Q9Y4Z0 139 aaKnown RBP9.99□□□□□ -0.81
ACTN1-207ENST00000553290 TNCP24821 2201 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 MSGN1A6NI15 193 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms