RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 RPS19P39019 145 aaKnown RBP8.18□□□□□ -1.1
GPN3-208ENST00000550974 ETV6P41212 452 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 C22orf42Q6IC83 251 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 BTNL8Q6UX41 500 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 PLEKHG7Q6ZR37 379 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 RBPMS2Q6ZRY4 209 aaKnown RBP8.18□□□□□ -1.1
GPN3-208ENST00000550974 UXS1Q8NBZ7 420 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 MCFD2Q8NI22 146 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 CCDC107Q8WV48 283 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 GALNT14Q96FL9 552 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 CHRDL1Q9BU40 450 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 SCRT1Q9BWW7 348 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 MOB1AQ9H8S9 216 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 NEK6Q9HC98 313 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 GNG12Q9UBI6 72 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 RNF213Q63HN8 5207 aa8.18□□□□□ -1.1
GPN3-208ENST00000550974 IGKV1-9A0A0C4DH69 117 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 J3QRK9 145 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 SYT7O43581 403 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 RBMXL2O75526 392 aaKnown RBP8.17□□□□□ -1.1
GPN3-208ENST00000550974 HLA-AP01891 365 aaKnown RBP8.17□□□□□ -1.1
GPN3-208ENST00000550974 CLEC2LP0C7M8 214 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 CELP19835 753 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 CCL1P22362 96 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 KRTAP10-2P60368 255 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 INSL4Q14641 139 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 ZNF846Q147U1 533 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 FXYD3Q14802 87 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 Q3ZCU0 254 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 TP53I3Q53FA7 332 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 OR13C5Q8NGS8 318 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 S100ZQ8WXG8 99 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 TMEM203Q969S6 136 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 SLC25A46Q96AG3 418 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 WDR12Q9GZL7 423 aaKnown RBP8.17□□□□□ -1.1
GPN3-208ENST00000550974 COA4Q9NYJ1 87 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 METTL1Q9UBP6 276 aaKnown RBP8.17□□□□□ -1.1
GPN3-208ENST00000550974 R4GMQ9 66 aa8.17□□□□□ -1.1
GPN3-208ENST00000550974 J3QLW9 94 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 MAGEB4O15481 346 aaPredicted RBP8.16□□□□□ -1.1
GPN3-208ENST00000550974 S1PR2O95136 353 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 CDRT1O95170 752 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 HTR3BO95264 441 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 GSTP1P09211 210 aaKnown RBP8.16□□□□□ -1.1
GPN3-208ENST00000550974 ZNF19P17023 458 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 LGALS7P47929 136 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 XGP55808 180 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 RPS11P62280 158 aaKnown RBP eCLIP8.16□□□□□ -1.1
GPN3-208ENST00000550974 ROM1Q03395 351 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 FAM131AQ6UXB0 335 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 CCDC190Q86UF4 302 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 C6orf223Q8N319 242 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 KCNG3Q8TAE7 436 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 SMIM19Q96E16 107 aa8.16□□□□□ -1.1
GPN3-208ENST00000550974 A0A1B0GVG6 124 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 ZNF320A2RRD8 509 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 PPP5D1E7EU14 171 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 OR2C1O95371 312 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 SMR3BP02814 79 aaPredicted RBP8.15□□□□□ -1.1
GPN3-208ENST00000550974 OCM2P0CE71 109 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 OCMP0CE72 109 aaPredicted RBP8.15□□□□□ -1.1
GPN3-208ENST00000550974 SDC2P34741 201 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 ADMP35318 185 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 KCNJ3P48549 501 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 NANOS3P60323 173 aaKnown RBP8.15□□□□□ -1.1
GPN3-208ENST00000550974 IFITM3Q01628 133 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 PAX5Q02548 391 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 EXOSC2Q13868 293 aaKnown RBP8.15□□□□□ -1.1
GPN3-208ENST00000550974 TRAM1Q15629 374 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 ODF3L2Q3SX64 289 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 CCDC58Q4VC31 144 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 RPL22L1Q6P5R6 122 aaKnown RBP8.15□□□□□ -1.1
GPN3-208ENST00000550974 CROCCP3Q8IVE0 287 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 PRR18Q8N4B5 295 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 CD300LFQ8TDQ1 290 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 MIXL1Q9H2W2 232 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 RHOFQ9HBH0 211 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 PEX16Q9Y5Y5 336 aa8.15□□□□□ -1.1
GPN3-208ENST00000550974 TRAV25A0A0B4J276 109 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 TMEM30CPA0ZSE6 113 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 TMEM213A2RRL7 107 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 ORC5O43913 435 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 SULT1C4O75897 302 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 ATF1P18846 271 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 PRKACBP22694 351 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 RORCP51449 518 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 ODF3L1Q8IXM7 274 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 Q8NAQ8 132 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 PP6455Q8WZ26 134 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 GHSRQ92847 366 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 C6orf62Q9GZU0 229 aaPredicted RBP8.14□□□□□ -1.11
GPN3-208ENST00000550974 ZNF230Q9UIE0 474 aaPredicted RBP8.14□□□□□ -1.11
GPN3-208ENST00000550974 GNG8Q9UK08 70 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 ING4Q9UNL4 249 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 V9GYH0 126 aa8.14□□□□□ -1.11
GPN3-208ENST00000550974 VPS13BQ7Z7G8 4022 aa8.13□□□□□ -1.11
GPN3-208ENST00000550974 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.13□□□□□ -1.11
GPN3-208ENST00000550974 IGHV4-28A0A0C4DH34 117 aa8.13□□□□□ -1.11
GPN3-208ENST00000550974 TRBV5-5A0A0J9YX44 114 aa8.13□□□□□ -1.11
GPN3-208ENST00000550974 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms