RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 PRRX1P54821 245 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 CLDN15P56746 228 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 CLDN18P56856 261 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 ERVS71-1P61550 626 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 RHOBP62745 196 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 CCL7P80098 99 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 MRPS34P82930 218 aaKnown RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 ZNF154Q13106 437 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 GPM6BQ13491 265 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 KIR2DS5Q14953 304 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 CST6Q15828 149 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 BATFQ16520 125 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 MS4A18Q3C1V0 323 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 SP6Q3SY56 376 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 SPATA45Q537H7 98 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 PHLDA2Q53GA4 152 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 OCIAD2Q56VL3 154 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 LRRC10Q5BKY1 277 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 CXorf66Q5JRM2 361 aaPredicted RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 SPIN3Q5JUX0 258 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 CST9LP1Q5W188 147 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 SLC25A47Q6Q0C1 308 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 RASL11AQ6T310 242 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 LCN15Q6UWW0 184 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 C12orf54Q6X4T0 127 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 Q6ZN92 141 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 DGAT2L6Q6ZPD8 337 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 C6orf201Q7Z4U5 140 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 BAGE3Q86Y29 109 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 BAGE2Q86Y30 109 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 WDFY1Q8IWB7 410 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 PRSS58Q8IYP2 241 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 LYG1Q8N1E2 194 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 ZNF525Q8N782 197 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 Q8NFD4 153 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 GJC3Q8NFK1 279 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 OR4P4Q8NGL7 312 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 PLPPR1Q8TBJ4 325 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 RNASE8Q8TDE3 154 aaKnown RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 FAM3CQ92520 227 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 RAB1CQ92928 201 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 TNFRSF14Q92956 283 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 SPTSSAQ969W0 71 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 FAM131CQ96AQ9 280 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 APH1AQ96BI3 265 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 RPUSD4Q96CM3 377 aaKnown RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 STARD4Q96DR4 205 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 SFRP2Q96HF1 295 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 PGAM5Q96HS1 289 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 FAM71F1Q96KD3 344 aaPredicted RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 ALKBH3Q96Q83 286 aaPredicted RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 NRTNQ99748 197 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 TXN2Q99757 166 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 HSPB9Q9BQS6 159 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 VPS25Q9BRG1 176 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 WDR61Q9GZS3 305 aaKnown RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 PARLQ9H300 379 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 ZNF665Q9H7R5 613 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 ZDHHC11Q9H8X9 412 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 PATZ1Q9HBE1 687 aaKnown RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 MBNL1Q9NR56 388 aaKnown RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 ZNF319Q9P2F9 582 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 IL36RNQ9UBH0 155 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 TBC1D29Q9UFV1 150 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 NXT1Q9UKK6 140 aaKnown RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 MCTS1Q9ULC4 181 aaKnown RBP2.74□□□□□ -1.97
CCNT1-203ENST00000550457 POLR1DQ9Y2S0 133 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 ARL2-SNX15V9GYD0 113 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 PLXND1Q9Y4D7 1925 aa2.74□□□□□ -1.97
CCNT1-203ENST00000550457 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 LOC105371242A0A075B767 164 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 IGKV1D-8A0A087WSZ0 117 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 TRAV9-2A0A087WT02 112 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 IGLV3-32A0A0A0MS00 114 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 TRBV6-6A0A0A6YYG2 114 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 LOC101059948A0A1B0GTJ6 334 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 MDFIC2A0A1B0GVS7 189 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 MED19A0JLT2 244 aaPredicted RBP2.73□□□□□ -1.97
CCNT1-203ENST00000550457 DPRXA6NFQ7 191 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 CBY3A6NI87 242 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 VSTM2BA6NLU5 285 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 CD300LBA8K4G0 201 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 TMEM150CB9EJG8 249 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 C9JCJ5 164 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 TMEM238C9JI98 176 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 NPIPB11E5RHQ5 1161 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 SLC33A1O00400 549 aaPredicted RBP2.73□□□□□ -1.97
CCNT1-203ENST00000550457 SYNGR2O43760 224 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 MPDU1O75352 247 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 HYPMO75409 117 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 OR2J2O76002 312 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 MPZL1O95297 269 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 TMEM50AO95807 157 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 MT-CO2P00403 227 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 CLPSP04118 112 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 IGKV3-11P04433 115 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 CD55P08174 381 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 OR10J4P0C629 311 aa2.73□□□□□ -1.97
CCNT1-203ENST00000550457 NBEAP1P0C6P0 100 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms