RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 Q6ZS49 121 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 TPRA1Q86W33 373 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 ZNF436-AS1Q8NC38 126 aaPredicted RBP6□□□□□ -1.45
SNHG1-223ENST00000545440 OR8U1Q8NH10 309 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 MYOZ3Q8TDC0 251 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 ABHD14BQ96IU4 210 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 KCTD7Q96MP8 289 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 P2RX4Q99571 388 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 RNF5Q99942 180 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 CENPOQ9BU64 300 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 MCRIP2Q9BUT9 160 aaKnown RBP6□□□□□ -1.45
SNHG1-223ENST00000545440 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 OR51J1Q9H342 316 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 TXNL4BQ9NX01 149 aaKnown RBP6□□□□□ -1.45
SNHG1-223ENST00000545440 RDH8Q9NYR8 311 aa6□□□□□ -1.45
SNHG1-223ENST00000545440 TRBV6-7A0A0A0MS04 114 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 IGHV7-81A0A0B4J1V7 117 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 A0A0B4J203 849 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 H7C2Y5 167 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 RRHO14718 337 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 SCGNO76038 276 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 PRB2P02812 416 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-223ENST00000545440 TFAP2AP05549 437 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 GNB3P16520 340 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 DTYMKP23919 212 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 CNTFRP26992 372 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 CDX1P47902 265 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-223ENST00000545440 CRIP2P52943 208 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-223ENST00000545440 EGFEM1PQ0D2K5 195 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 LIN54Q6MZP7 749 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 C18orf65Q6ZTR6 163 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 PDPNQ86YL7 162 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 CCDC28AQ8IWP9 274 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 TCTEX1D1Q8N7M0 179 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 OR10J5Q8NHC4 309 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 MRAPQ8TCY5 172 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 C4orf3Q8WVX3 66 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 DPF1Q92782 380 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 RBMXL1Q96E39 390 aaKnown RBP5.99□□□□□ -1.45
SNHG1-223ENST00000545440 ZNF503Q96F45 646 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 RITA1Q96K30 269 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 PARP11Q9NR21 331 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 ZNF221Q9UK13 617 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 SSR3Q9UNL2 185 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 DNAH3Q8TD57 4116 aa5.99□□□□□ -1.45
SNHG1-223ENST00000545440 A0A075B6Q4 140 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 TRAV41A0A0B4J266 112 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 SMIM30A4D0T7 59 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 CCL24O00175 119 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 MPPED1O15442 326 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 PROP1O75360 226 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 APOA2P02652 100 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 NDPQ00604 133 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 FHL3Q13643 280 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 ARFRP1Q13795 201 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 PLGLAQ15195 96 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 IGSF11Q5DX21 431 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 ZNF660Q6AZW8 331 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-223ENST00000545440 SFXN4Q6P4A7 337 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 GLDNQ6ZMI3 551 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-223ENST00000545440 ZNF383Q8NA42 475 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 LGALS14Q8TCE9 139 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 UBE2E2Q96LR5 201 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 TSNAXQ99598 290 aaKnown RBP5.98□□□□□ -1.45
SNHG1-223ENST00000545440 ATG5Q9H1Y0 275 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 OR2D2Q9H210 308 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 GAB2Q9UQC2 676 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 ETV7Q9Y603 341 aa5.98□□□□□ -1.45
SNHG1-223ENST00000545440 G3V318 75 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 M0R1X1 148 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 BET1O15155 118 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 IGKV1-16P04430 117 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 GSTT2P0CG29 244 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 GSTT2BP0CG30 244 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 EGR2P11161 476 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-223ENST00000545440 SDC2P34741 201 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 TALDO1P37837 337 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 PITPNAQ00169 270 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 RUNX1Q01196 453 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 NEDD8Q15843 81 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 ECSCRQ19T08 205 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 DEFB136Q30KP8 78 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 TIMM50Q3ZCQ8 353 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 HACD4Q5VWC8 232 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 PYHIN1Q6K0P9 492 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 TMEM65Q6PI78 240 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 H1FOOQ8IZA3 346 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-223ENST00000545440 DRAXINQ8NBI3 349 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-223ENST00000545440 MINDY2Q8NBR6 621 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 GINS4Q9BRT9 223 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 OR51E2Q9H255 320 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 DCSTAMPQ9H295 470 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 FBXL15Q9H469 300 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 SDHAF2Q9NX18 166 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 RHBDL2Q9NX52 303 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 METTL1Q9UBP6 276 aaKnown RBP5.97□□□□□ -1.45
SNHG1-223ENST00000545440 ZNF230Q9UIE0 474 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-223ENST00000545440 DAPK2Q9UIK4 370 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 RNF150Q9ULK6 438 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 FOXA2Q9Y261 457 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms