RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 GABRB1P18505 474 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 SLC2A5P22732 501 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 MAGEA2P43356 314 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 OR3A3P47888 321 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 ATP5G2Q06055 141 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 EXOSC2Q13868 293 aaKnown RBP2.97□□□□□ -1.93
SNHG1-220ENST00000544550 GINS1Q14691 196 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 RSU1Q15404 277 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 MPV17LQ2QL34 196 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 FAM106AQ4KMX7 169 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 MORN2Q502X0 79 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 LY6G6FQ5SQ64 297 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 ATAD3CQ5T2N8 411 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 FAM131AQ6UXB0 335 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 HACD2Q6Y1H2 254 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 PLEKHG7Q6ZR37 379 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF554Q86TJ5 538 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 GPHB5Q86YW7 130 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 SERPINA12Q8IW75 414 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 ODF3L1Q8IXM7 274 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 SLC35F2Q8IXU6 374 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 IQCF1Q8N6M8 205 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 NRACQ8N912 160 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 BBS1Q8NFJ9 593 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 PXT1Q8NFP0 134 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 OR2AK2Q8NG84 335 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 OR10V1Q8NGI7 309 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 OR11H2Q8NH07 326 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 OR4A5Q8NH83 315 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 NEK7Q8TDX7 302 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 CCDC107Q8WV48 283 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 TLCD1Q96CP7 247 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 PHB2Q99623 299 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 SPAG8Q99932 426 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-220ENST00000544550 APOL4Q9BPW4 351 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 TTTY10Q9BZA0 68 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 EFCAB1Q9HAE3 211 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 SPACA1Q9HBV2 294 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 OR2S2Q9NQN1 319 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 CLN6Q9NWW5 311 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 COA4Q9NYJ1 87 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 PIPOXQ9P0Z9 390 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 ABCD2Q9UBJ2 740 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 JPT1Q9UK76 154 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 TRAPPC2LQ9UL33 140 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 ING4Q9UNL4 249 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 GAB2Q9UQC2 676 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 WASHC3Q9Y3C0 194 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 RPL36Q9Y3U8 105 aaKnown RBP2.97□□□□□ -1.93
SNHG1-220ENST00000544550 V9GYQ6 96 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 PKHD1P08F94 4074 aa2.97□□□□□ -1.93
SNHG1-220ENST00000544550 MUC4Q99102 2169 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 IGLV2-18A0A075B6J9 118 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 SAA2-SAA4A0A096LPE2 208 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 OR4C46A6NHA9 309 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 METTL15A6NJ78 407 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 A8MWP6 167 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 H0YJW9 148 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 RAB29O14966 203 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 SNX3O60493 162 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 YPEL1O60688 119 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 EDF1O60869 148 aaKnown RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 CA11O75493 328 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 SULT1C4O75897 302 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 HBZP02008 142 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 MT-ND4P03905 459 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 CD74P04233 296 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 ISG15P05161 165 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 GSTT2P0CG29 244 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 GSTT2BP0CG30 244 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 RBMY1CP0DJD4 496 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 SAA2P0DJI9 122 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 PSG1P11464 419 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 MYOD1P15172 320 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 RPL35AP18077 110 aaKnown RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 FCGR2BP31994 310 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 CAPGP40121 348 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 RFX2P48378 723 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 MNAT1P51948 309 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 CMC4P56277 68 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 LINC00205P59089 165 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 HTD2P86397 168 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 CDK5Q00535 292 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 TMEM187Q14656 261 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 PSG5Q15238 335 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 KISS1Q15726 138 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 RNF212Q495C1 297 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 NHLRC3Q5JS37 347 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 SYT6Q5T7P8 510 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF691Q5VV52 312 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 LIPKQ5VXJ0 399 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 LAMTOR1Q6IAA8 161 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 C8orf82Q6P1X6 216 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 BTNL8Q6UX41 500 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF497Q6ZNH5 498 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 Q6ZTC4 211 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 FAM220AQ7Z4H9 259 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 TMEM179BQ7Z7N9 219 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 UXS1Q8NBZ7 420 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 OR10G2Q8NGC3 310 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms