RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 H2BFWTQ7Z2G1 175 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 C11orf42Q8N5U0 333 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 STOML3Q8TAV4 291 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 LSM10Q969L4 123 aaKnown RBP11.19□□□□□ -0.62
HCFC2-202ENST00000544223 MMP24Q9Y5R2 645 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 NAV3Q8IVL0 2385 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 PTPN13Q12923 2485 aa11.19□□□□□ -0.62
HCFC2-202ENST00000544223 IGHV3-72A0A0B4J1Y9 119 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 ZNF705EA8MWA4 302 aaPredicted RBP11.18□□□□□ -0.62
HCFC2-202ENST00000544223 IGHV2-70P01814 119 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 P0C879 139 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 UBE2KP61086 200 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 SRSF3P84103 164 aaKnown RBP11.18□□□□□ -0.62
HCFC2-202ENST00000544223 MIDNQ504T8 468 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 OR8G2PQ6IF36 304 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 HAPLN4Q86UW8 402 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 ZBTB34Q8NCN2 500 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 C17orf50Q8WW18 174 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 CORO2AQ92828 525 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 DUXBA0A1W2PPF3 345 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 RAB29O14966 203 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 CT45A6P0DMU7 189 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 CT45A5P0DMU8 189 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 CT45A7P0DMV0 189 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 ESCO2Q56NI9 601 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 ZNF66Q6ZN08 573 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 S1PR3Q99500 378 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 MRPL20Q9BYC9 149 aaKnown RBP11.18□□□□□ -0.62
HCFC2-202ENST00000544223 TMEM231Q9H6L2 316 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 PSENENQ9NZ42 101 aa11.18□□□□□ -0.62
HCFC2-202ENST00000544223 A0A1W2PRD5 423 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 A0A1W2PRF3 423 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 A0A1W2PRM7 423 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 SRRM4A7MD48 611 aaKnown RBP11.17□□□□□ -0.62
HCFC2-202ENST00000544223 WNT2P09544 360 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 PVALBP20472 110 aaPredicted RBP11.17□□□□□ -0.62
HCFC2-202ENST00000544223 TNFRSF9Q07011 255 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 HEPN1Q6WQI6 88 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 SLC25A48Q6ZT89 311 aaKnown RBP11.17□□□□□ -0.62
HCFC2-202ENST00000544223 NRGNQ92686 78 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 RAB1BQ9H0U4 201 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 HRH4Q9H3N8 390 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 SNAPC5O75971 98 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 COX7A1P24310 79 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 DDB2Q92466 427 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 LINC00052Q96N35 136 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 GAL3ST2Q9H3Q3 398 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 AUP1Q9Y679 476 aa11.17□□□□□ -0.62
HCFC2-202ENST00000544223 ANKRD17O75179 2603 aaKnown RBP11.17□□□□□ -0.62
HCFC2-202ENST00000544223 MFSD2BA6NFX1 497 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 MED6O75586 246 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 PPOXP50336 477 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 DLX6P56179 175 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 STPG2Q8N412 459 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 RITA1Q96K30 269 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 TAS2R3Q9NYW6 316 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 C22orf46C9J442 243 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 GPR157Q5UAW9 335 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 TMEM182Q6ZP80 229 aaPredicted RBP11.16□□□□□ -0.62
HCFC2-202ENST00000544223 OR10X1Q8NGY0 326 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 SIRT7Q9NRC8 400 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 ABCA1O95477 2261 aa11.16□□□□□ -0.62
HCFC2-202ENST00000544223 TMEM155Q4W5P6 130 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 ZNF525Q8N782 197 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 OR4C12Q96R67 309 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 LINC00574Q9H8X3 128 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 TMEM140Q9NV12 185 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 ONECUT1Q9UBC0 465 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 KAAG1Q9UBP8 84 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 A1L4Q6 167 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 H7C2Y5 167 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 JTBO76095 146 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 IFNA17P01571 189 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 IGHV1-8P0DP01 117 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 RAB7AP51149 207 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 ARF6P62330 175 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 MEF2CQ06413 473 aaPredicted RBP11.15□□□□□ -0.62
HCFC2-202ENST00000544223 ABHD12Q8N2K0 398 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 RHOVQ96L33 236 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 HINT2Q9BX68 163 aa11.15□□□□□ -0.62
HCFC2-202ENST00000544223 ABCA2Q9BZC7 2435 aa11.15□□□□□ -0.63
HCFC2-202ENST00000544223 A6NNC1 897 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 CEBPZOSA8MTT3 80 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 TOR1AO14656 332 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 TAAR5O14804 337 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 HPRT1P00492 218 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 PXDC1Q5TGL8 231 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 UBAC2Q8NBM4 344 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 PHYHIPLQ96FC7 376 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 RSG1Q9BU20 258 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.14□□□□□ -0.63
HCFC2-202ENST00000544223 PFDN2Q9UHV9 154 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 PRELID3BQ9Y3B1 194 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 FAM96BQ9Y3D0 163 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 PPIAL4CA0A0B4J2A2 164 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 J3QR06 171 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 PPIAL4GP0DN37 164 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 ATP6V0CP27449 155 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 WDR25Q64LD2 544 aaPredicted RBP11.14□□□□□ -0.63
HCFC2-202ENST00000544223 OR4A47Q6IF82 309 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms