RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 C10orf91Q5T1B1 145 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 CASP12Q6UXS9 341 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 IL34Q6ZMJ4 242 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 PDZD9Q8IXQ8 264 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM183AQ8IXX5 376 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 LGI3Q8N145 548 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 C10orf111Q8N326 155 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 OR4K2Q8NGD2 314 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 OR5D18Q8NGL1 313 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 OR13D1Q8NGV5 346 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 OR10G6Q8NH81 332 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 OR1S1Q8NH92 325 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 C16orf78Q8WTQ4 265 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 TWIST2Q8WVJ9 160 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 CDS1Q92903 461 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 RERGQ96A58 199 aaPredicted RBP2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 CCDC115Q96NT0 180 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 ERMAPQ96PL5 475 aaPredicted RBP2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 ABCB9Q9NP78 766 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 PLEKHJ1Q9NW61 149 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 RBFOX1Q9NWB1 397 aaKnown RBP2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 SCN3BQ9NY72 215 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 DNAJC27Q9NZQ0 273 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 OR52A1Q9UKL2 312 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 CARHSP1Q9Y2V2 147 aaKnown RBP2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 CSAG2Q9Y5P2 127 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 DNAJC15Q9Y5T4 150 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 TENM4Q6N022 2769 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 TP53BP1Q12888 1972 aaPredicted RBP2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 MIA3Q5JRA6 1907 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 NOTCH2Q04721 2471 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 KALRNO60229 2985 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 TEX15Q9BXT5 2789 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 MYO18AQ92614 2054 aaKnown RBP2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 ABCA12Q86UK0 2595 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 NBEAQ8NFP9 2946 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 MEIKINA0A087WXM9 373 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TRAV8-6A0A0B4J262 113 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM72A0PK05 275 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM218A2RU14 115 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 C7orf66A4D0T2 115 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TRAPPC13A5PLN9 417 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 COLCA2A8K830 154 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 FTCDNL1E5RQL4 147 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 M0R143 59 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TP53I11O14683 189 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 AZIN1O14977 448 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 SLC31A1O15431 190 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 BCL2L11O43521 198 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 CD5LO43866 347 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 INSP01308 110 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 IGKV1D-16P01601 117 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 C1QCP02747 245 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 OMGP23515 440 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 S100A2P29034 98 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 SLC6A1P30531 599 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 CTRLP40313 264 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 CXCL5P42830 114 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 POLR2JP52435 117 aaKnown RBP2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 STC1P52823 247 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 WNT4P56705 351 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 RPS20P60866 119 aaKnown RBP2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 RAB8AP61006 207 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 LYZP61626 148 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 PEA15Q15121 130 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 MRGPRG-AS1Q2M3A8 158 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 GOLGA7BQ2TAP0 167 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 AKIRIN2Q53H80 203 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TTC32Q5I0X7 151 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 PYY3Q5JQD4 70 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TCTEX1D4Q5JR98 221 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 LRRN1Q6UXK5 716 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 CALHM3Q86XJ0 350 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM156Q8N614 296 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM251Q8N6I4 163 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 MAPK1IP1LQ8NDC0 245 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 OR5L1Q8NGL2 311 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 OR10G4Q8NGN3 311 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 OR6N1Q8NGY5 312 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 OR13G1Q8NGZ3 307 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF675Q8TD23 568 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 RXFP4Q8TDU9 374 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 LCN9Q8WX39 176 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 ACOT12Q8WYK0 555 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 MALSU1Q96EH3 234 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 PACRGQ96M98 296 aaPredicted RBP2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 EMC6Q9BV81 110 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TAPBPLQ9BX59 468 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 CHST5Q9GZS9 411 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 GFRA4Q9GZZ7 299 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 PCBD2Q9H0N5 130 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 MED28Q9H204 178 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 TUBA4BQ9H853 241 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 MMP26Q9NRE1 261 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 HEBP1Q9NRV9 189 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 CALML5Q9NZT1 146 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 C3orf18Q9UK00 162 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF225Q9UK10 706 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 SIGLEC7Q9Y286 467 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 LSM2Q9Y333 95 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms