RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 IGHV4OR15-8A0A075B7B6 117 aa15.64■□□□□ 0.09
DDB1-220ENST00000542337 A0A087WW49 117 aa15.64■□□□□ 0.09
DDB1-220ENST00000542337 VMA21Q3ZAQ7 101 aa15.64■□□□□ 0.09
DDB1-220ENST00000542337 TMEM177Q53S58 311 aa15.64■□□□□ 0.09
DDB1-220ENST00000542337 HACD4Q5VWC8 232 aa15.64■□□□□ 0.09
DDB1-220ENST00000542337 NR2C2APQ86WQ0 139 aa15.64■□□□□ 0.09
DDB1-220ENST00000542337 H1FOOQ8IZA3 346 aaPredicted RBP15.64■□□□□ 0.09
DDB1-220ENST00000542337 POC5Q8NA72 575 aa15.64■□□□□ 0.09
DDB1-220ENST00000542337 OR5T1Q8NG75 326 aa15.64■□□□□ 0.09
DDB1-220ENST00000542337 ELOVL1Q9BW60 279 aa15.64■□□□□ 0.09
DDB1-220ENST00000542337 DCSTAMPQ9H295 470 aa15.64■□□□□ 0.09
DDB1-220ENST00000542337 RRP15Q9Y3B9 282 aaKnown RBP15.64■□□□□ 0.09
DDB1-220ENST00000542337 IGLV2-23P01705 113 aa15.63■□□□□ 0.09
DDB1-220ENST00000542337 OR6Q1Q8NGQ2 317 aa15.63■□□□□ 0.09
DDB1-220ENST00000542337 WWC2-AS2Q96NR7 200 aa15.63■□□□□ 0.09
DDB1-220ENST00000542337 OR4C12Q96R67 309 aa15.63■□□□□ 0.09
DDB1-220ENST00000542337 RANGRFQ9HD47 186 aaPredicted RBP15.63■□□□□ 0.09
DDB1-220ENST00000542337 SLC22A5O76082 557 aa15.62■□□□□ 0.09
DDB1-220ENST00000542337 CRYGBP07316 175 aa15.62■□□□□ 0.09
DDB1-220ENST00000542337 GNG2P59768 71 aa15.62■□□□□ 0.09
DDB1-220ENST00000542337 ZNF773Q6PK81 442 aa15.62■□□□□ 0.09
DDB1-220ENST00000542337 TEX45Q8NA69 505 aa15.62■□□□□ 0.09
DDB1-220ENST00000542337 PHB2Q99623 299 aa15.62■□□□□ 0.09
DDB1-220ENST00000542337 SMAD5-AS1Q9Y6J3 95 aa15.62■□□□□ 0.09
DDB1-220ENST00000542337 CRYZL1O95825 349 aa15.61■□□□□ 0.09
DDB1-220ENST00000542337 SNRPBP14678 240 aaKnown RBP15.61■□□□□ 0.09
DDB1-220ENST00000542337 ZP3P21754 424 aa15.61■□□□□ 0.09
DDB1-220ENST00000542337 DUTP33316 252 aaKnown RBP15.61■□□□□ 0.09
DDB1-220ENST00000542337 PJVKQ0ZLH3 352 aa15.61■□□□□ 0.09
DDB1-220ENST00000542337 ACSM6Q6P461 480 aa15.61■□□□□ 0.09
DDB1-220ENST00000542337 SFXN4Q6P4A7 337 aa15.61■□□□□ 0.09
DDB1-220ENST00000542337 OSR1Q8TAX0 266 aaPredicted RBP15.61■□□□□ 0.09
DDB1-220ENST00000542337 DCUN1D5Q9BTE7 237 aa15.61■□□□□ 0.09
DDB1-220ENST00000542337 ELF5Q9UKW6 265 aaPredicted RBP15.61■□□□□ 0.09
DDB1-220ENST00000542337 PRELID3BQ9Y3B1 194 aa15.61■□□□□ 0.09
DDB1-220ENST00000542337 OR2W1Q9Y3N9 320 aa15.61■□□□□ 0.09
DDB1-220ENST00000542337 IGKV1D-8A0A087WSZ0 117 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 J3QRK9 145 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 CREBL2O60519 120 aaPredicted RBP15.6■□□□□ 0.09
DDB1-220ENST00000542337 ACTL6BO94805 426 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 CD36P16671 472 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 AADACP22760 399 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 UBE2KP61086 200 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 CNIH2Q6PI25 160 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 ZNF645Q8N7E2 425 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 C5orf30Q96GV9 206 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 U3KQK5 164 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 COL7A1Q02388 2944 aa15.6■□□□□ 0.09
DDB1-220ENST00000542337 TMEM235A6NFC5 223 aa15.59■□□□□ 0.09
DDB1-220ENST00000542337 SRRM4A7MD48 611 aaKnown RBP15.59■□□□□ 0.09
DDB1-220ENST00000542337 SDC2P34741 201 aa15.59■□□□□ 0.09
DDB1-220ENST00000542337 SCAND1P57086 179 aa15.59■□□□□ 0.09
DDB1-220ENST00000542337 LGALS14Q8TCE9 139 aa15.59■□□□□ 0.09
DDB1-220ENST00000542337 NUDCD2Q8WVJ2 157 aa15.59■□□□□ 0.09
DDB1-220ENST00000542337 DDB2Q92466 427 aa15.59■□□□□ 0.09
DDB1-220ENST00000542337 OR51E2Q9H255 320 aa15.59■□□□□ 0.09
DDB1-220ENST00000542337 COA4Q9NYJ1 87 aa15.59■□□□□ 0.09
DDB1-220ENST00000542337 MRPS7Q9Y2R9 242 aaKnown RBP15.59■□□□□ 0.09
DDB1-220ENST00000542337 LOC100506127A0A0U1RQW1 187 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 MSGN1A6NI15 193 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 MPPED1O15442 326 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 TUSC2O75896 110 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 BRI3O95415 125 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 NFYAP23511 347 aaPredicted RBP15.58■□□□□ 0.08
DDB1-220ENST00000542337 MXD1Q05195 221 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 TNXAQ16473 311 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 PRSS8Q16651 343 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 USMG5Q96IX5 58 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 RHBDL2Q9NX52 303 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 ETV7Q9Y603 341 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 DNAH9Q9NYC9 4486 aa15.58■□□□□ 0.08
DDB1-220ENST00000542337 ANKRD34BA5PLL1 514 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 LINC00473A8K010 186 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 FCGR3BO75015 233 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 HLA-DQB1P01920 261 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 GP9P14770 177 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 SPNP16150 400 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 SSBP2P81877 361 aaPredicted RBP15.57■□□□□ 0.08
DDB1-220ENST00000542337 TATDN3Q17R31 274 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 IDNKQ5T6J7 187 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 KCTD9Q7L273 389 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 ANKRD13BQ86YJ7 626 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 ACOT12Q8WYK0 555 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 ASCL2Q99929 193 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 TINAGL1Q9GZM7 467 aaPredicted RBP15.57■□□□□ 0.08
DDB1-220ENST00000542337 ANXA10Q9UJ72 324 aa15.57■□□□□ 0.08
DDB1-220ENST00000542337 RBMX2Q9Y388 322 aaKnown RBP15.57■□□□□ 0.08
DDB1-220ENST00000542337 ARPC4P59998 168 aa15.56■□□□□ 0.08
DDB1-220ENST00000542337 HSD17B10Q99714 261 aaKnown RBP15.56■□□□□ 0.08
DDB1-220ENST00000542337 RSRP1Q9BUV0 290 aa15.56■□□□□ 0.08
DDB1-220ENST00000542337 TRAV18A0A075B6X5 111 aa15.55■□□□□ 0.08
DDB1-220ENST00000542337 OR9G9P0C7N8 305 aa15.55■□□□□ 0.08
DDB1-220ENST00000542337 APELAP0DMC3 54 aa15.55■□□□□ 0.08
DDB1-220ENST00000542337 CDK10Q15131 360 aa15.55■□□□□ 0.08
DDB1-220ENST00000542337 NEDD8Q15843 81 aa15.55■□□□□ 0.08
DDB1-220ENST00000542337 IDO2Q6ZQW0 420 aa15.55■□□□□ 0.08
DDB1-220ENST00000542337 MMD2Q8IY49 270 aa15.55■□□□□ 0.08
DDB1-220ENST00000542337 SRSF12Q8WXF0 261 aaKnown RBP15.55■□□□□ 0.08
DDB1-220ENST00000542337 SPIN2AQ99865 258 aa15.55■□□□□ 0.08
DDB1-220ENST00000542337 SPIN2BQ9BPZ2 258 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms