RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 CFHR3Q02985 330 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 TMEM267Q0VDI3 215 aaPredicted RBP10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 FOXE3Q13461 319 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 PLGLAQ15195 96 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 VAX1Q5SQQ9 334 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 KCTD9Q7L273 389 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 PPP1R27Q86WC6 154 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 MFSD4AQ8N468 514 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 TCTEX1D1Q8N7M0 179 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 OR4F17Q8NGA8 305 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 NOL4LQ96MY1 436 aaPredicted RBP10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 OR4F4Q96R69 305 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 SLC5A7Q9GZV3 580 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 FBXL15Q9H469 300 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 METTL1Q9UBP6 276 aaKnown RBP10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 NUBP2Q9Y5Y2 271 aa10.83□□□□□ -0.68
TNFSF13B-206ENST00000542136 TCRBV4S1A1TA0A5B7 111 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 SHOXO15266 292 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 PMP2P02689 132 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 VDAC1P21796 283 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 HLA-DMAP28067 261 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 PPIFP30405 207 aaKnown RBP10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 GNRHRP30968 328 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 UCP3P55916 312 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 UBE2KP61086 200 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 HERV-K104P61576 105 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 AKIRIN2Q53H80 203 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 PYHIN1Q6K0P9 492 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 C11orf44Q8N8P7 122 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 MINDY2Q8NBR6 621 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 OR52I2Q8NH67 350 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 OR4S2Q8NH73 311 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 MCFD2Q8NI22 146 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 CD300LFQ8TDQ1 290 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 SECTM1Q8WVN6 248 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 DGCR14Q96DF8 476 aaKnown RBP10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 DIRAS2Q96HU8 199 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 HARBI1Q96MB7 349 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 SOSTQ9BQB4 213 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 CCL28Q9NRJ3 127 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 TAS2R8Q9NYW2 309 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 KLK11Q9UBX7 282 aa10.82□□□□□ -0.68
TNFSF13B-206ENST00000542136 CCDC160A6NGH7 325 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 FCN1O00602 326 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 CREBL2O60519 120 aaPredicted RBP10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 IGLV1-40P01703 118 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 TNFSF8P32971 234 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 CDX1P47902 265 aaPredicted RBP10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 TSPAN5P62079 268 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 RPL30P62888 115 aaKnown RBP10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 CATR1Q13166 79 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 VMA21Q3ZAQ7 101 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 C19orf54Q5BKX5 351 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 ZNF329Q86UD4 541 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 TMEM17Q86X19 198 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 CMTM1Q8IZ96 169 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 CADM3Q8N126 398 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 ARRDC1Q8N5I2 433 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 TMEM229BQ8NBD8 167 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 SMIM4Q8WVI0 70 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 RBMXL1Q96E39 390 aaKnown RBP10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 TMEM68Q96MH6 324 aa10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 ZNF2Q9BSG1 426 aaPredicted RBP10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 FAM212BQ9NTI7 297 aaPredicted RBP10.81□□□□□ -0.68
TNFSF13B-206ENST00000542136 TRAV41A0A0B4J266 112 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 SRRM4A7MD48 611 aaKnown RBP10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 J3QRK9 145 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 ATP6V0E1O15342 81 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 GSTZ1O43708 216 aaPredicted RBP10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 SLC25A17O43808 307 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 CRYZL1O95825 349 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 HRASP01112 189 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 CD74P04233 296 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 FCER2P06734 321 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 FGF2P09038 288 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 EGR2P11161 476 aaPredicted RBP10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 PTBP1P26599 531 aaKnown RBP eCLIP10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 PSMB8P28062 276 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 BRWD1-AS2P59051 145 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 CXorf66Q5JRM2 361 aaPredicted RBP10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 C10orf99Q6UWK7 81 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 ZNF818PQ6ZRF7 136 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 VSTM2AQ8TAG5 236 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 TCTEX1D2Q8WW35 142 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 C6orf62Q9GZU0 229 aaPredicted RBP10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 LINC00527Q9UJ94 153 aa10.8□□□□□ -0.68
TNFSF13B-206ENST00000542136 VWFP04275 2813 aa10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 FCGR3BO75015 233 aa10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 BRI3O95415 125 aa10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 TSPAN15O95858 294 aa10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 IFNA6P05013 189 aa10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 S100GP29377 79 aa10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 TAS2R19P59542 299 aa10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 FXYD4P59646 89 aa10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 RPL23AP62750 156 aaKnown RBP10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 RNASE10Q5GAN6 216 aaKnown RBP10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 MYOZ3Q8TDC0 251 aa10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 PARP11Q9NR21 331 aa10.79□□□□□ -0.68
TNFSF13B-206ENST00000542136 ANK2Q01484 3957 aa10.78□□□□□ -0.68
TNFSF13B-206ENST00000542136 FABP12A6NFH5 140 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms