RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 RBMX2Q9Y388 322 aaKnown RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 TRAV1-2A0A0B4J238 106 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 TRBV5-5A0A0J9YX44 114 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 FAM90A7PA6NKC0 464 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 FAM90A23PA8MXZ1 464 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 RRHO14718 337 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 OGG1O15527 345 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 YPEL1O60688 119 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 RGS11O94810 467 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 DHFRP00374 187 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 IGHV3-11P01762 117 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 HLA-DQB1P01920 261 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 CSTBP04080 98 aaKnown RBP5.56□□□□□ -1.52
YBX3-209ENST00000540747 CD1AP06126 327 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 GLAP06280 429 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 GSTT2P0CG29 244 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 GSTT2BP0CG30 244 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 GTF2F2P13984 249 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 RAB3BP20337 219 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 BDKRB2P30411 391 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 MECP2P51608 486 aaKnown RBP5.56□□□□□ -1.52
YBX3-209ENST00000540747 RPS11P62280 158 aaKnown RBP eCLIP5.56□□□□□ -1.52
YBX3-209ENST00000540747 SSBP2P81877 361 aaPredicted RBP5.56□□□□□ -1.52
YBX3-209ENST00000540747 SLC22A6Q4U2R8 563 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 CCDC58Q4VC31 144 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 AKIRIN2Q53H80 203 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 RAB12Q6IQ22 244 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 NOXA1Q86UR1 476 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 SAMD12Q8N8I0 201 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 OR52L2PQ8NGH6 319 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 MRPL30Q8TCC3 161 aaKnown RBP5.56□□□□□ -1.52
YBX3-209ENST00000540747 GHSRQ92847 366 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 ORAI1Q96D31 301 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 MRPS24Q96EL2 167 aaKnown RBP5.56□□□□□ -1.52
YBX3-209ENST00000540747 ST6GAL2Q96JF0 529 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 Q96M66 194 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 YPEL2Q96QA6 119 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 HIPK2Q9H2X6 1198 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 FBXL15Q9H469 300 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 RETNQ9HD89 108 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 OR2S2Q9NQN1 319 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 SIGLEC8Q9NYZ4 499 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 ABRACLQ9P1F3 81 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 TRAPPC2LQ9UL33 140 aa5.56□□□□□ -1.52
YBX3-209ENST00000540747 TRAV8-7A0A075B6U6 113 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 TRBV5-7A0A0A0MS05 114 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 SHISA3A0PJX4 238 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 NOTOA8MTQ0 251 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 MCRIP1C9JLW8 97 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 H0YJW9 148 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 RGS13O14921 159 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 BRI3O95415 125 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 CD2P06729 351 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 CT45A6P0DMU7 189 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 CT45A5P0DMU8 189 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 CT45A7P0DMV0 189 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 ARSBP15848 533 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 FSTP19883 344 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 GPR176Q14439 515 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 INSL4Q14641 139 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 P2RY14Q15391 338 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 HMGN3Q15651 99 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 HSD17B12Q53GQ0 312 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 ACTBL2Q562R1 376 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 DMKNQ6E0U4 476 aaPredicted RBP5.55□□□□□ -1.52
YBX3-209ENST00000540747 SFXN4Q6P4A7 337 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 ZNF562Q6V9R5 426 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 PPP1R27Q86WC6 154 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 PRR18Q8N4B5 295 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 OR5AN1Q8NGI8 311 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 NEK7Q8TDX7 302 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 CMTM3Q96MX0 182 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 OR14A2Q96R54 314 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 ELOVL1Q9BW60 279 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 PARP12Q9H0J9 701 aaKnown RBP5.55□□□□□ -1.52
YBX3-209ENST00000540747 SLA2Q9H6Q3 261 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 MRPS7Q9Y2R9 242 aaKnown RBP5.55□□□□□ -1.52
YBX3-209ENST00000540747 ALG5Q9Y673 324 aa5.55□□□□□ -1.52
YBX3-209ENST00000540747 IZUMO1RA6ND01 250 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 OR5H14A6NHG9 310 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 H3BUA1 57 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 TMEM127O75204 238 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 PROP1O75360 226 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 RBBP9O75884 186 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 MAS1P04201 325 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 IFNA6P05013 189 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 EIF4EP06730 217 aaKnown RBP5.54□□□□□ -1.52
YBX3-209ENST00000540747 CSN3P07498 182 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 FUT3P21217 361 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 ZP3P21754 424 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 RCVRNP35243 200 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 OR10A3P58181 314 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 TPPP2P59282 170 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 IFITM2Q01629 132 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 TMEM267Q0VDI3 215 aaPredicted RBP5.54□□□□□ -1.52
YBX3-209ENST00000540747 CDK10Q15131 360 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 PSG5Q15238 335 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 TATDN3Q17R31 274 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 ZNF880Q6PDB4 577 aa5.54□□□□□ -1.52
YBX3-209ENST00000540747 UNQ5815/PRO19632Q6UWF5 114 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms