RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ZNF66Q6ZN08 573 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 LYZL2Q7Z4W2 148 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 SELENOHQ8IZQ5 122 aaKnown RBP8.58□□□□□ -1.04
ATL3-204ENST00000540699 BCL6BQ8N143 479 aaPredicted RBP8.58□□□□□ -1.04
ATL3-204ENST00000540699 PIP4P2Q8N4L2 257 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.58□□□□□ -1.04
ATL3-204ENST00000540699 OR11H6Q8NGC7 330 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 OR11H4Q8NGC9 324 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 OR2T35Q8NGX2 323 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 OR51H1Q8NH63 302 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 OR10C1Q96KK4 312 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 ZNF251Q9BRH9 671 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 C19orf24Q9BVV8 132 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 NMES1Q9C002 83 aa8.58□□□□□ -1.04
ATL3-204ENST00000540699 FAM212BQ9NTI7 297 aaPredicted RBP8.58□□□□□ -1.04
ATL3-204ENST00000540699 LIN7CQ9NUP9 197 aaKnown RBP8.58□□□□□ -1.04
ATL3-204ENST00000540699 IGHV3OR16-10A0A075B7F0 116 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 SAA2-SAA4A0A096LPE2 208 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 TRAV14DV4A0A0A6YYC5 116 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 LINC00473A8K010 186 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 ODF3BA8MYP8 253 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 IGKV1-39P01597 117 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 IGHV3-7P01780 117 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 IGKV1D-39P04432 117 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 HOXB5P09067 269 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 SAA2P0DJI9 122 aaPredicted RBP8.57□□□□□ -1.04
ATL3-204ENST00000540699 DUTP33316 252 aaKnown RBP8.57□□□□□ -1.04
ATL3-204ENST00000540699 GPR12P47775 334 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 TMEM268Q5VZI3 342 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 GSG1LQ6UXU4 331 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 TCTEX1D1Q8N7M0 179 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 SLC35G3Q8N808 338 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 AJUBAQ96IF1 538 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 C2orf50Q96LR7 162 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 ZNF48Q96MX3 618 aaPredicted RBP8.57□□□□□ -1.04
ATL3-204ENST00000540699 HSD17B10Q99714 261 aaKnown RBP8.57□□□□□ -1.04
ATL3-204ENST00000540699 MS4A7Q9GZW8 240 aaPredicted RBP8.57□□□□□ -1.04
ATL3-204ENST00000540699 TMEM133Q9H2Q1 129 aa8.57□□□□□ -1.04
ATL3-204ENST00000540699 RANBP3Q9H6Z4 567 aaPredicted RBP8.57□□□□□ -1.04
ATL3-204ENST00000540699 A0A1W2PPE3 182 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 C5orf51A6NDU8 294 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 HAX1O00165 279 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 RAB29O14966 203 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 NPFFO15130 113 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 SAA4P35542 130 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 GNG10P50151 68 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 PRB3Q04118 309 aaPredicted RBP8.56□□□□□ -1.04
ATL3-204ENST00000540699 CATR1Q13166 79 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 RPL39P5Q59GN2 51 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 NMSQ5H8A3 153 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 OR13D1Q8NGV5 346 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 DDB2Q92466 427 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 RBPMSQ93062 196 aaKnown RBP8.56□□□□□ -1.04
ATL3-204ENST00000540699 SEC22AQ96IW7 307 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 HYLS1Q96M11 299 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 PDCD10Q9BUL8 212 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 ZNRD1Q9P1U0 126 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 TMED3Q9Y3Q3 217 aa8.56□□□□□ -1.04
ATL3-204ENST00000540699 SOX21Q9Y651 276 aaPredicted RBP8.56□□□□□ -1.04
ATL3-204ENST00000540699 IGHV2-26A0A0B4J1V2 119 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 C13orf42A0A1B0GVH6 325 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 FAM25EA8MYX2 175 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 J3QR06 171 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 M0R1X1 148 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 IFNA21P01568 189 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 IGLV1-47P01700 117 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 RPA2P15927 270 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 VDAC1P21796 283 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 ZNF137PP52743 207 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 LINC00205P59089 165 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 HILS1P60008 231 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 CYCSP99999 105 aaKnown RBP8.55□□□□□ -1.04
ATL3-204ENST00000540699 DEFB112Q30KQ8 113 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 LAMTOR1Q6IAA8 161 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 FAM71F2Q6NXP2 309 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 ZNF833PQ6ZTB9 187 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 ZNF695Q8IW36 515 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 PDZD9Q8IXQ8 264 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 LYG1Q8N1E2 194 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 PNKDQ8N490 385 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 C9orf62Q8N4C0 152 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 ZBTB8BQ8NAP8 495 aaPredicted RBP8.55□□□□□ -1.04
ATL3-204ENST00000540699 OR9G1Q8NH87 305 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 ZNF418Q8TF45 676 aaPredicted RBP8.55□□□□□ -1.04
ATL3-204ENST00000540699 PPP1R1CQ8WVI7 109 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 TCTEX1D2Q8WW35 142 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 C22orf15Q8WYQ4 148 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 CLEC7AQ9BXN2 247 aa8.55□□□□□ -1.04
ATL3-204ENST00000540699 TBL2Q9Y4P3 447 aaKnown RBP8.55□□□□□ -1.04
ATL3-204ENST00000540699 PIGBOS1A0A0B4J2F0 54 aa8.54□□□□□ -1.04
ATL3-204ENST00000540699 A0A0G2JRQ6 117 aa8.54□□□□□ -1.04
ATL3-204ENST00000540699 A0A0U1RQK1 487 aa8.54□□□□□ -1.04
ATL3-204ENST00000540699 RBFOX2O43251 390 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATL3-204ENST00000540699 TCF21O43680 179 aa8.54□□□□□ -1.04
ATL3-204ENST00000540699 RAMP3O60896 148 aa8.54□□□□□ -1.04
ATL3-204ENST00000540699 IGKV1-5P01602 117 aa8.54□□□□□ -1.04
ATL3-204ENST00000540699 SERPINE2P07093 398 aa8.54□□□□□ -1.04
ATL3-204ENST00000540699 P0C879 139 aa8.54□□□□□ -1.04
ATL3-204ENST00000540699 SLC25A4P12235 298 aa8.54□□□□□ -1.04
ATL3-204ENST00000540699 LYL1P12980 280 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms