RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PROP1O75360 226 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 BRI3O95415 125 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 IGLV1-51P01701 117 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 GSTT2P0CG29 244 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 GSTT2BP0CG30 244 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 GNB3P16520 340 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 RAB3BP20337 219 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 TNXAQ16473 311 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 LCN12Q6JVE5 192 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 TEX45Q8NA69 505 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 OSR1Q8TAX0 266 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-211ENST00000539843 ACOT12Q8WYK0 555 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 TINAGL1Q9GZM7 467 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-211ENST00000539843 PEMTQ9UBM1 199 aa11.75□□□□□ -0.53
UBE3B-211ENST00000539843 NKX1-2Q9UD57 310 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-211ENST00000539843 MRPS7Q9Y2R9 242 aaKnown RBP11.75□□□□□ -0.53
UBE3B-211ENST00000539843 ANKRD65E5RJM6 399 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 MFNGO00587 321 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 TUSC2O75896 110 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 SCGNO76038 276 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 SLC22A5O76082 557 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 IGLV2-23P01705 113 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 CTXN2P0C2S0 81 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 LYL1P12980 280 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 CD36P16671 472 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 MAP2K4P45985 399 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 LINC00205P59089 165 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 UBE2KP61086 200 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 FAM209BQ5JX69 171 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 SNAPC3Q92966 411 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 CNBD2Q96M20 576 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 DCUN1D5Q9BTE7 237 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 ATG5Q9H1Y0 275 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 PRELID3BQ9Y3B1 194 aa11.74□□□□□ -0.53
UBE3B-211ENST00000539843 KMT2CQ8NEZ4 4911 aaKnown RBP11.73□□□□□ -0.53
UBE3B-211ENST00000539843 CRYZL1O95825 349 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 OR9G9P0C7N8 305 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 IGHV4-30-4P0DP06 118 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 GALP22466 123 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 DTYMKP23919 212 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 SYNJ2BPP57105 145 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 CASC10Q5T4H9 136 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 Q6ZS49 121 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 HAPLN4Q86UW8 402 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 SLC25A42Q86VD7 318 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 MAFIPQ8WZ33 124 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 ISOC1Q96CN7 298 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 TUBA4BQ9H853 241 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 NDUFB11Q9NX14 153 aa11.73□□□□□ -0.53
UBE3B-211ENST00000539843 ZNF230Q9UIE0 474 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-211ENST00000539843 TRDV1A0A1B0GX56 115 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 MSGN1A6NI15 193 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 FAM223BA6NKX1 122 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 AIREO43918 545 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 OR2A4O95047 310 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 IFNA6P05013 189 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 CRYGBP07316 175 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 DUTP33316 252 aaKnown RBP11.72□□□□□ -0.53
UBE3B-211ENST00000539843 PJVKQ0ZLH3 352 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 KLF5Q13887 457 aaPredicted RBP11.72□□□□□ -0.53
UBE3B-211ENST00000539843 SSX1Q16384 188 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 PRSS8Q16651 343 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 ZNF343Q6P1L6 599 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 IZUMO2Q6UXV1 221 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 FAM223AQ8IWN6 122 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 MMD2Q8IY49 270 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 Q8N402 240 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 NRG4Q8WWG1 115 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 SRSF12Q8WXF0 261 aaKnown RBP11.72□□□□□ -0.53
UBE3B-211ENST00000539843 CITED4Q96RK1 184 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 SPATA25Q9BR10 227 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 KCNK7Q9Y2U2 307 aa11.72□□□□□ -0.53
UBE3B-211ENST00000539843 STAB2Q8WWQ8 2551 aa11.71□□□□□ -0.53
UBE3B-211ENST00000539843 A8MZ25 164 aa11.71□□□□□ -0.53
UBE3B-211ENST00000539843 RAB27BO00194 218 aa11.71□□□□□ -0.53
UBE3B-211ENST00000539843 MRPS14O60783 128 aaKnown RBP11.71□□□□□ -0.53
UBE3B-211ENST00000539843 OR10A3P58181 314 aa11.71□□□□□ -0.53
UBE3B-211ENST00000539843 ATP5G2Q06055 141 aa11.71□□□□□ -0.53
UBE3B-211ENST00000539843 KCTD9Q7L273 389 aa11.71□□□□□ -0.53
UBE3B-211ENST00000539843 H1FOOQ8IZA3 346 aaPredicted RBP11.71□□□□□ -0.53
UBE3B-211ENST00000539843 ZNF645Q8N7E2 425 aa11.71□□□□□ -0.53
UBE3B-211ENST00000539843 OR2K2Q8NGT1 345 aa11.71□□□□□ -0.53
UBE3B-211ENST00000539843 VSTM2AQ8TAG5 236 aa11.71□□□□□ -0.53
UBE3B-211ENST00000539843 DPPA5A6NC42 116 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 APELAP0DMC3 54 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 GNG2P59768 71 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 PLA2G7Q13093 441 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 CDK10Q15131 360 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 C22orf42Q6IC83 251 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 ADAD2Q8NCV1 583 aaKnown RBP11.7□□□□□ -0.54
UBE3B-211ENST00000539843 TM2D3Q9BRN9 247 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 ST6GALNAC5Q9BVH7 336 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 DCSTAMPQ9H295 470 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 SIGLEC8Q9NYZ4 499 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 OR2W1Q9Y3N9 320 aa11.7□□□□□ -0.54
UBE3B-211ENST00000539843 SRRM4A7MD48 611 aaKnown RBP11.69□□□□□ -0.54
UBE3B-211ENST00000539843 FCGR3BO75015 233 aa11.69□□□□□ -0.54
UBE3B-211ENST00000539843 DHFRP00374 187 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms