RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 IGKV1-6A0A0C4DH72 117 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 DEGS1O15121 323 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 RPL19P84098 196 aaKnown RBP7.63□□□□□ -1.19
SNHG1-209ENST00000538654 Q0VG73 95 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 DAZAP2Q15038 168 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-209ENST00000538654 RSPO4Q2I0M5 234 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-209ENST00000538654 FAM69BQ5VUD6 431 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF324BQ6AW86 544 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-209ENST00000538654 LINC00596Q86U02 117 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 C17orf82Q86X59 251 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-209ENST00000538654 BAGE3Q86Y29 109 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 BAGE2Q86Y30 109 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 CALHM1Q8IU99 346 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 SIGLECL1Q8N7X8 197 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 FADS6Q8N9I5 356 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 OR10G3Q8NGC4 313 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 LMX1AQ8TE12 382 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 RAB1CQ92928 201 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 C16orf92Q96LL3 132 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 PEMTQ9UBM1 199 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 TRBV9A0A0B4J1U6 114 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 A0A1B0GUS0 222 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 K7EP13 123 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 HMGB3O15347 200 aaKnown RBP7.63□□□□□ -1.19
SNHG1-209ENST00000538654 SERF1AO75920 110 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 ZFAND5O76080 213 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 CAMPP49913 170 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 PCBD1P61457 104 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 RBX1P62877 108 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 CD69Q07108 199 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 TDRG1Q3Y452 100 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 OR8G2PQ6IF36 304 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 PCSK4Q6UW60 755 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 SHISA6Q6ZSJ9 500 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 PLXDC1Q8IUK5 500 aa7.63□□□□□ -1.19
SNHG1-209ENST00000538654 A0A1W2PPV4 95 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 NKX6-3A6NJ46 265 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 RNF212BA8MTL3 300 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 NPIPB11E5RHQ5 1161 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 CLDN1O95832 211 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 IGKV1-5P01602 117 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 BCL3P20749 454 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 TFPI2P48307 235 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 LHX2P50458 406 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 DGAT2L7PQ6IED9 249 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 KLHDC1Q8N7A1 406 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 GATAD1Q8WUU5 269 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF48Q96MX3 618 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-209ENST00000538654 PCDH15Q96QU1 1955 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 SPAG17Q6Q759 2223 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 GRIFINA4D1Z8 144 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 FAM166BA8MTA8 275 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 IGKV1-39P01597 117 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 IGKV1D-39P04432 117 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 OR5G3P0C626 314 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 IZUMO4Q1ZYL8 232 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 MKXQ8IYA7 352 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 C1orf174Q8IYL3 243 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 OR10G8Q8NGN5 311 aa7.62□□□□□ -1.19
SNHG1-209ENST00000538654 MRPL18Q9H0U6 180 aaKnown RBP7.62□□□□□ -1.19
SNHG1-209ENST00000538654 DIRC3C9JPN6 131 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 TRAPPC2LH3BP13 241 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 IGLV3-19P01714 112 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 NPPCP23582 126 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 ACP1P24666 158 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 GNB1P62873 340 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 TLE1Q04724 770 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF766Q5HY98 468 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 RAET1LQ5VY80 246 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 KMT5CQ86Y97 462 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 OR10P1Q8NGE3 313 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 FAM110AQ9BQ89 295 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF703Q9H7S9 590 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-209ENST00000538654 TMEM38BQ9NVV0 291 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 TP53TG3Q9ULZ0 132 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 LAMTOR2Q9Y2Q5 125 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 IGLV3-12A0A075B6K2 115 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 NDUFB4O95168 129 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF32P17041 273 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 CD38P28907 300 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 CTRLP40313 264 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 HNRNPA3P51991 378 aaKnown RBP7.61□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF90Q03938 601 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 UBE2V1Q13404 147 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 MMDQ15546 238 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 SPATA45Q537H7 98 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 TCF23Q7RTU1 214 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 TIPARPQ7Z3E1 657 aaKnown RBP7.61□□□□□ -1.19
SNHG1-209ENST00000538654 C1orf210Q8IVY1 113 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 OR1K1Q8NGR3 316 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 PSMF1Q92530 271 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 NPCDR1Q9BY65 106 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 PRDM14Q9GZV8 571 aa7.61□□□□□ -1.19
SNHG1-209ENST00000538654 BEX4Q9NWD9 120 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-209ENST00000538654 A0A1W2PR77 199 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 A8MZ25 164 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 TIAF1O95411 115 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 TOMM40O96008 361 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 C1QTNF9P0C862 333 aa7.6□□□□□ -1.19
SNHG1-209ENST00000538654 TIMP3P35625 211 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms