RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 GPN1Q9HCN4 374 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 YAE1D1Q9NRH1 226 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 LIN7CQ9NUP9 197 aaKnown RBP12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 MINOS1-NBL1R4GNA1 71 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 MDFIC2A0A1B0GVS7 189 aa12.61□□□□□ -0.39
SFSWAP-206ENST00000537582 RNF212BA8MTL3 300 aa12.61□□□□□ -0.39
SFSWAP-206ENST00000537582 SNRPGP15A8MWD9 76 aa12.61□□□□□ -0.39
SFSWAP-206ENST00000537582 S1PR2O95136 353 aa12.61□□□□□ -0.39
SFSWAP-206ENST00000537582 UCP1P25874 307 aa12.61□□□□□ -0.39
SFSWAP-206ENST00000537582 LIAT1Q6ZQX7 453 aa12.61□□□□□ -0.39
SFSWAP-206ENST00000537582 OR5AN1Q8NGI8 311 aa12.61□□□□□ -0.39
SFSWAP-206ENST00000537582 RITA1Q96K30 269 aa12.61□□□□□ -0.39
SFSWAP-206ENST00000537582 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
SFSWAP-206ENST00000537582 TBL2Q9Y4P3 447 aaKnown RBP12.61□□□□□ -0.39
SFSWAP-206ENST00000537582 CCSO14618 274 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 SSNA1O43805 119 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 ADAP1O75689 374 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 LY6G6DO95868 133 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 CEACAM3P40198 252 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 LPAR6P43657 344 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 RAB13P51153 203 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 TMEM268Q5VZI3 342 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 C12orf45Q8N5I9 185 aaPredicted RBP12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 CFHR4Q92496 578 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 TMUB1Q9BVT8 246 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 MED28Q9H204 178 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 SLC35D1Q9NTN3 355 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 MPTX1A8MV57 137 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 CRYZL1O95825 349 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 FCN2Q15485 313 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 IZUMO4Q1ZYL8 232 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 FAM120AOSQ5T036 256 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 LYZL2Q7Z4W2 148 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 SELENOHQ8IZQ5 122 aaKnown RBP12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 VKORC1L1Q8N0U8 176 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 SLC35G3Q8N808 338 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 MALSU1Q96EH3 234 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 ADTRPQ96IZ2 230 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 PRELID3BQ9Y3B1 194 aa12.6□□□□□ -0.39
SFSWAP-206ENST00000537582 HIVEP1P15822 2718 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 A0A0G2JRQ6 117 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 H7C2Y5 167 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 SIX6O95475 246 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 CDS2O95674 445 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 SERPINE2P07093 398 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 HOXB5P09067 269 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 ANXA3P12429 323 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 CXCL3P19876 107 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 OR11H7Q8NGC8 314 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 NANPQ8TBE9 248 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 WDR89Q96FK6 387 aaPredicted RBP12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 TMEM56Q96MV1 263 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 PHB2Q99623 299 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 GON7Q9BXV9 100 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 NUP50Q9UKX7 468 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 TMEM56-RWDD3S4R434 201 aa12.59□□□□□ -0.39
SFSWAP-206ENST00000537582 DBX1A6NMT0 343 aa12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 IGKV1-5P01602 117 aa12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 CD99P14209 185 aa12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 G6PCP35575 357 aa12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 Q71RC1 249 aaPredicted RBP12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 ZNF695Q8IW36 515 aa12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 LGI3Q8N145 548 aa12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 OR8H3Q8N146 312 aa12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 COQ8AQ8NI60 647 aa12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 HYLS1Q96M11 299 aa12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.4
SFSWAP-206ENST00000537582 SRRM4A7MD48 611 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 GOSR2O14653 212 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 TXNL1O43396 289 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 VENTXO95231 258 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 KRASP01116 189 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 APOA2P02652 100 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 S100A1P23297 94 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 CNTFRP26992 372 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 RTL8BQ17RB0 113 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 C11orf88Q6PI97 169 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 FAM219AQ8IW50 185 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 GSX1Q9H4S2 264 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 ANK3Q12955 4377 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-206ENST00000537582 SONP18583 2426 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 IGKV1D-33P01593 117 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 IGKV1-33P01594 117 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 HABP2Q14520 560 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 HNF4GQ14541 408 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 DEFB112Q30KQ8 113 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 SSX9Q7RTT3 188 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 LRTM2Q8N967 370 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 RBPMSQ93062 196 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 MS4A7Q9GZW8 240 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 PLSCR3Q9NRY6 295 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 MGAT4CQ9UBM8 478 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 A0A0B4J2A0 478 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 OOSP1A8MZH6 123 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 RBFOX2O43251 390 aaKnown RBP eCLIP12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 B3GALNT1O75752 331 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 SULT1A3P0DMM9 295 aa12.56□□□□□ -0.4
SFSWAP-206ENST00000537582 SULT1A4P0DMN0 295 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms