RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 MGLLQ99685 303 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 TINAGL1Q9GZM7 467 aaPredicted RBP6.45□□□□□ -1.38
USP28-203ENST00000537490 CCDC90BQ9GZT6 254 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 EDA2RQ9HAV5 297 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 PEF1Q9UBV8 284 aaKnown RBP6.45□□□□□ -1.38
USP28-203ENST00000537490 ZNF230Q9UIE0 474 aaPredicted RBP6.45□□□□□ -1.38
USP28-203ENST00000537490 RAB22AQ9UL26 194 aa6.45□□□□□ -1.38
USP28-203ENST00000537490 A0A075B6Q4 140 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 IGKV1D-8A0A087WSZ0 117 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 A0A0B4J203 849 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 MSGN1A6NI15 193 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 RAB27BO00194 218 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 MFNGO00587 321 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 SHOXO15266 292 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 BRI3O95415 125 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 CSN3P07498 182 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 CRHBPP24387 322 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 PSMD7P51665 324 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 OR10A3P58181 314 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 MRPS15P82914 257 aaKnown RBP6.44□□□□□ -1.38
USP28-203ENST00000537490 SSX1Q16384 188 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 PRSS48Q7RTY5 328 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 SGPP2Q8IWX5 399 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 TEX45Q8NA69 505 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 OR10R2Q8NGX6 335 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 OR10J5Q8NHC4 309 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 DDB2Q92466 427 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 THAP7Q9BT49 309 aaPredicted RBP6.44□□□□□ -1.38
USP28-203ENST00000537490 PALMDQ9NP74 551 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 ACOT13Q9NPJ3 140 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 COA4Q9NYJ1 87 aa6.44□□□□□ -1.38
USP28-203ENST00000537490 LCE6AA0A183 80 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 IZUMO1RA6ND01 250 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 LINC00473A8K010 186 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 H0Y980 276 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 J3QRK9 145 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 CRYZL1O95825 349 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 PRH1P02810 166 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 OR9G9P0C7N8 305 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 HIST1H1DP16402 221 aaKnown RBP6.43□□□□□ -1.38
USP28-203ENST00000537490 AADACP22760 399 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 DUTP33316 252 aaKnown RBP6.43□□□□□ -1.38
USP28-203ENST00000537490 MECP2P51608 486 aaKnown RBP6.43□□□□□ -1.38
USP28-203ENST00000537490 UBE2KP61086 200 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 TAGLNQ01995 201 aaKnown RBP6.43□□□□□ -1.38
USP28-203ENST00000537490 TNXAQ16473 311 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 PRSS8Q16651 343 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 HAGHQ16775 308 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 RTL8BQ17RB0 113 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 IDO2Q6ZQW0 420 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 H1FOOQ8IZA3 346 aaPredicted RBP6.43□□□□□ -1.38
USP28-203ENST00000537490 ADAD2Q8NCV1 583 aaKnown RBP6.43□□□□□ -1.38
USP28-203ENST00000537490 USMG5Q96IX5 58 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 PHB2Q99623 299 aa6.43□□□□□ -1.38
USP28-203ENST00000537490 ELF5Q9UKW6 265 aaPredicted RBP6.43□□□□□ -1.38
USP28-203ENST00000537490 RBM7Q9Y580 266 aaKnown RBP6.43□□□□□ -1.38
USP28-203ENST00000537490 TRAV1-2A0A0B4J238 106 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 IFITM5A6NNB3 132 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 PDCD5O14737 125 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 DIRAS3O95661 229 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 RRASP10301 218 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 RAB6AP20340 208 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 GADD45AP24522 165 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 RANBP1P43487 201 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 ZNF45Q02386 682 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 CBX3Q13185 183 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 ARFRP1Q13795 201 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 TATDN3Q17R31 274 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 RPEL1Q2QD12 228 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 VMA21Q3ZAQ7 101 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 ADAMTSL5Q6ZMM2 481 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 Q6ZS49 121 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 NR2C2APQ86WQ0 139 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 SRSF12Q8WXF0 261 aaKnown RBP6.42□□□□□ -1.38
USP28-203ENST00000537490 ADTRPQ96IZ2 230 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 SPATA25Q9BR10 227 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 GINS4Q9BRT9 223 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 ZNF430Q9H8G1 570 aaPredicted RBP6.42□□□□□ -1.38
USP28-203ENST00000537490 AKIP1Q9NQ31 210 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 SIGLEC8Q9NYZ4 499 aa6.42□□□□□ -1.38
USP28-203ENST00000537490 DYNC2H1Q8NCM8 4307 aaKnown RBP6.42□□□□□ -1.38
USP28-203ENST00000537490 TRBV9A0A0B4J1U6 114 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 SMIM30A4D0T7 59 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 BMPR1BO00238 502 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 FCGR3BO75015 233 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 SAA1P0DJI8 122 aaPredicted RBP6.41□□□□□ -1.38
USP28-203ENST00000537490 RAB3BP20337 219 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 TALDO1P37837 337 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 RPL30P62888 115 aaKnown RBP6.41□□□□□ -1.38
USP28-203ENST00000537490 RHOGP84095 191 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 ATP5G2Q06055 141 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 TBCEQ15813 527 aaPredicted RBP6.41□□□□□ -1.38
USP28-203ENST00000537490 CDNFQ49AH0 187 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 C10orf55Q5SWW7 151 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 LCN12Q6JVE5 192 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 ZNF367Q7RTV3 350 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 Q8N402 240 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 OSR1Q8TAX0 266 aaPredicted RBP6.41□□□□□ -1.38
USP28-203ENST00000537490 ACOT12Q8WYK0 555 aa6.41□□□□□ -1.38
USP28-203ENST00000537490 SNAPC3Q92966 411 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms