RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 SAMD12Q8N8I0 201 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 BEST4Q8NFU0 473 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 GRPEL2Q8TAA5 225 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 C4orf3Q8WVX3 66 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 SNAPC3Q92966 411 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 HARBI1Q96MB7 349 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 GPHA2Q96T91 129 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 ALX4Q9H161 411 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-206ENST00000536398 FOXA2Q9Y261 457 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-206ENST00000536398 I3L521 148 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 SHOXO15266 292 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 XRCC3O43542 346 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 TUSC2O75896 110 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 CRYZL1O95825 349 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 OR2B11Q5JQS5 317 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 UBE2NLQ5JXB2 153 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 ASPHD1Q5U4P2 390 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 IDO2Q6ZQW0 420 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 CROCCP3Q8IVE0 287 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 OR11H1Q8NG94 326 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 ARPC1AQ92747 370 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 SLC25A46Q96AG3 418 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 S100A16Q96FQ6 103 aaKnown RBP11.08□□□□□ -0.64
UBE3B-206ENST00000536398 UBE2E2Q96LR5 201 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 MS4A10Q96PG2 267 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 VSIG4Q9Y279 399 aa11.08□□□□□ -0.64
UBE3B-206ENST00000536398 RBMX2Q9Y388 322 aaKnown RBP11.08□□□□□ -0.64
UBE3B-206ENST00000536398 FCGR3BO75015 233 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 TMEM127O75204 238 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 CNIH1O95406 144 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 EIF4EP06730 217 aaKnown RBP11.07□□□□□ -0.64
UBE3B-206ENST00000536398 AADACP22760 399 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 FCGR2CP31995 323 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 LGALS7P47929 136 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 BRWD1-AS2P59051 145 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 TAS2R20P59543 309 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 ARPC4P59998 168 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 EIF4EBP1Q13541 118 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-206ENST00000536398 FHL3Q13643 280 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 RTL8BQ17RB0 113 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 AKIRIN2Q53H80 203 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 ACTBL2Q562R1 376 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 OR5T1Q8NG75 326 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 OR1N2Q8NGR9 330 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 MRAPQ8TCY5 172 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 ADTRPQ96IZ2 230 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 COMMD3Q9UBI1 195 aa11.07□□□□□ -0.64
UBE3B-206ENST00000536398 WI2-2373I1.2A0A1W2PRP0 233 aa11.06□□□□□ -0.64
UBE3B-206ENST00000536398 K7EIL1 84 aa11.06□□□□□ -0.64
UBE3B-206ENST00000536398 DUS4LO95620 317 aaKnown RBP11.06□□□□□ -0.64
UBE3B-206ENST00000536398 IGHV3-11P01762 117 aa11.06□□□□□ -0.64
UBE3B-206ENST00000536398 RRASP10301 218 aa11.06□□□□□ -0.64
UBE3B-206ENST00000536398 TAGLNQ01995 201 aaKnown RBP11.06□□□□□ -0.64
UBE3B-206ENST00000536398 EGFEM1PQ0D2K5 195 aa11.06□□□□□ -0.64
UBE3B-206ENST00000536398 TMEM267Q0VDI3 215 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-206ENST00000536398 TMEM69Q5SWH9 247 aa11.06□□□□□ -0.64
UBE3B-206ENST00000536398 REC114Q7Z4M0 266 aa11.06□□□□□ -0.64
UBE3B-206ENST00000536398 CCL28Q9NRJ3 127 aa11.06□□□□□ -0.64
UBE3B-206ENST00000536398 TNFSF12O43508 249 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 APELAP0DMC3 54 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 UBE2KP61086 200 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 RUNX1Q01196 453 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 CBX3Q13185 183 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 CTF1Q16619 201 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 PRSS8Q16651 343 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 KCTD9Q7L273 389 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 TCTEX1D1Q8N7M0 179 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 OR5M8Q8NGP6 311 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 SECTM1Q8WVN6 248 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 DCUN1D5Q9BTE7 237 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 TAS2R8Q9NYW2 309 aa11.05□□□□□ -0.64
UBE3B-206ENST00000536398 PPYP01298 95 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 SAA1P0DJI8 122 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-206ENST00000536398 TPPP2P59282 170 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 VMA21Q3ZAQ7 101 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 GPR107Q5VW38 600 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 ANKRD13BQ86YJ7 626 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 VKORC1L1Q8N0U8 176 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 MFSD4AQ8N468 514 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 TEX45Q8NA69 505 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 OR5AP2Q8NGF4 316 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 OSR1Q8TAX0 266 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-206ENST00000536398 TCTEX1D2Q8WW35 142 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
UBE3B-206ENST00000536398 MCRIP2Q9BUT9 160 aaKnown RBP11.04□□□□□ -0.64
UBE3B-206ENST00000536398 ZNF355PQ9NSJ1 428 aa11.04□□□□□ -0.64
UBE3B-206ENST00000536398 MRPS7Q9Y2R9 242 aaKnown RBP11.04□□□□□ -0.64
UBE3B-206ENST00000536398 MSGN1A6NI15 193 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 HPGDSO60760 199 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 SLC22A5O76082 557 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 GABARAPO95166 117 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 PMP2P02689 132 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 TRGV3P03979 118 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 CBX5P45973 191 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 RFX2P48378 723 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 SLURP1P55000 103 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 FXYD4P59646 89 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 DEFA5Q01523 94 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 ZNF616Q08AN1 781 aa11.03□□□□□ -0.64
UBE3B-206ENST00000536398 CDK10Q15131 360 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms